Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2618 125 5e-24 seq2601 96.9 2e-15 >seq2618 Length=24172 Score = 125 bits (138), Expect = 5e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || ||||||||||| || || || |||||||| | | Sbjct 20719 ATGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCT 20778 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | ||| | | || |||||| || |||||||| | || ||||| ||| Sbjct 20779 GATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAA 20838 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| |||| ||||| ||||||||||||||||| | ||| ||| | ||| || || Sbjct 20839 CAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAAT 20898 Query 23791 ATACAAAAAGAGTCCACATTACAT 23814 ||||| || || || ||| | ||| Sbjct 20899 ATACAGAAGGAATCAACACTTCAT 20922 >seq2601 Length=24241 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || ||||| || || | || ||||| ||||| || | || ||||| | Sbjct 23950 AAAATGCAAATATTCGTAAAGACGTTGACAGGAAAGACGATTACGTTGGAGGTTGAGCCT 23891 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || ||| |||| ||| | || | || | || |||||||||||| | || || || Sbjct 23890 AGTGATACTATTGAGAATGTGAAGGCGAAGA-TTCAAGACAAAGAAGGTATTCCTCCTGA 23832 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| ||||| |||||||| || || || ||||||| | ||| ||| | || || Sbjct 23831 CCAACAACGTTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGACTA 23772 Query 23787 CAACATACAAAAAGA 23801 |||||| || ||||| Sbjct 23771 CAACATCCAGAAAGA 23757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337761853751120