Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq165 107 2e-18 >seq165 Length=488026 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| || ||||| || |||||||||||||||||||| | | || ||||||||||| || Sbjct 487790 GGGTCTTGGTGTACCGTTCAATATTGCAAGTTATGCTTTATTAACATATATGATTGCTCA 487731 Query 20550 TGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTA 20606 | |||| | ||||||| | ||||| || || ||||| || || || ||||||||||| Sbjct 487730 TATTACTGGTTTAAAACCTGGTGAGTTCGTTCACACAATTGGCGATGCGCATATTTA 487674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399038855949130