Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3397 100 5e-16 >seq3397 Length=2750 Score = 100 bits (110), Expect = 5e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || | ||| | || | ||| ||||||||||||||||| || || || || ||| | Sbjct 2671 GTTCGGTTGGGCGAGATGTAAGTTAAGAGACTGGCTTTGGTCAATAAATGGGGCACGACC 2612 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 ||| ||||||| |||||| |||| |||||||||||||| || |||||| ||| Sbjct 2611 TGCAGCCATATCGATAATCTTCTTTTGCGAAATCTCCCATACTGTCTTGTACA 2559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794858666747040