Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq221 89.7 6e-13 >seq221 Length=415109 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 168441 TGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACAGCGAGAGTTTT 168500 |||||| || ||||||| |||||||| || || |||||||| ||||| | |||||| Sbjct 354424 TGGAAAGACACCATAATTGTCTCTACCGACAACTCCAAGACCAGCCACAGCTAAAGTTTT 354483 Query 168501 CGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCCGTACCAGCTTT 168560 ||||| ||||||||||| | || || || || | ||| | | || || || || Sbjct 354484 GGCTGAGTCACCCTCTGTTAAAATAAGAGTGCATTGAGAAGAATTTTTAGTCCCTGCATT 354543 Query 168561 GTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGA 168599 || ||||| || ||||| || || || ||| |||||| Sbjct 354544 ATTTGCATCATCTAATTTAGGTATTCCTTTGAGCTTAGA 354582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588756356125200