Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq846 98.7 1e-15 >seq846 Length=120812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTC 153969 |||| || | || || ||||| | ||||| ||||| || ||||||||||||||||||| Sbjct 108505 TACAAACGCGGGAACAACATATTCGTAGAGATAAAGCCACAAGTAACATCTGCACAGCTC 108446 Query 153970 AGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTA 154028 | ||| | || ||||||||| ||| |||||||||| |||||||| | || ||| || Sbjct 108445 AAGCATTACTTGCTAATATGGCTGCTTTCTATGCAGTTTATCATGGGCCGGAAGGATTA 108387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996797066560