Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1115 114 2e-20 >seq1115 Length=78361 Score = 114 bits (126), Expect = 2e-20 Identities = 195/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 126900 GAAACAATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCA 126959 |||| |||||| ||| ||||||||||||| |||| ||||||| |||| ||| Sbjct 34854 GAAATTATGTATAATGGATTTACTGGAAGAAAATTAAATTCACAAATTTTCTTAGGACCA 34913 Query 126960 ACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGT 127019 || || ||||| ||| | |||||||||||| | |||||||| ||| | | || |||| Sbjct 34914 ACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCTCGTGGT 34973 Query 127020 CAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGA 127079 | || || | | |||||||||| | |||||| | | |||||| || | Sbjct 34974 CCTGTTCAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACGT 35033 Query 127080 TTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139 ||||| ||||||||| |||||| | | ||||| || ||||||||||| |||| Sbjct 35034 TTTGGTGAAATGGAACGTGATTGTCAAATAGCACATGGTGCAGCACAATTTTTACGTGAA 35093 Query 127140 AGAATGTTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGTA 127182 | | ||||| | ||||| | |||| | |||| |||| Sbjct 35094 CGTTTATTTTTTGCTAGTGATCCATATCAAGTGTATGTTTGTA 35136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658157664986640