Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq846 105 8e-18 >seq846 Length=120812 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 || ||| || | |||||||| |||||||||| ||| |||||| || || | |||||| Sbjct 108387 TAATCCTTCCGGCCCATGATAAACTGCATAGAAAGCAGCCATATTAGCAAGTAATGCTTG 108446 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 ||||||||||||||||| || ||||| ||||| | |||||| || || | ||||||| Sbjct 108447 AGCTGTGCAGATGTTACTTGTGGCTTTATCTCTACGAATATGTTGTTCCCGCGTTTGTAA 108506 Query 139379 TGCTAATCTGTATGCAGG 139396 || | || || ||||| Sbjct 108507 GGCAAGTCGATACGCAGG 108524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578782477021680