Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_028765.1 Length=142348 Score E Sequences producing significant alignments: (Bits) Value seq8440 756 0.0 seq3308 655 0.0 seq2836 627 8e-175 >seq8440 Length=882 Score = 756 bits (838), Expect = 0.0 Identities = 590/702 (84%), Gaps = 15/702 (2%) Strand=Plus/Minus Query 139968 ATTGACAGTCACTTGAAACCATGATATTATTAAGATAACAAAAA-CAAACAGAAAAGGAA 140026 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 882 ATTGACAGTCACTTGAAACCATGATATTATTAAGATAACAAAAAACAAACAGAAAAGGAA 823 Query 140027 TTGATTATAATGAAATCTATCAAAACTATCGAAAACTTATTAGAAAAAGCAGAAAACAAA 140086 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 822 TTGATTATAATGAAATTTATCAAAACTATCGAAAACTTATTAGAAAAAGCAGAAAACAAA 763 Query 140087 GGGCAAGCAATTTTAAACGGTCGTTACTTTGACGGGTACAGTAAAGGTGAACTGGAAGAA 140146 |||||||||||||||||||||||||||||||||||||| || |||||||| || || ||| Sbjct 762 GGGCAAGCAATTTTAAACGGTCGTTACTTTGACGGGTATAGCAAAGGTGAGCTTGAGGAA 703 Query 140147 AAATATGCAATTGAAATTGACGGCAATAAATTAATTATGAGACACTGGGGAACACAAACA 140206 |||||||||||||||||||| ||||| ||||| |||||| | |||||||| ||||||||| Sbjct 702 AAATATGCAATTGAAATTGATGGCAACAAATTGATTATGCGTCACTGGGGTACACAAACA 643 Query 140207 ATTGAGATTGACTTAACAAGAAAGGAAATAGTTTCATATTACGGTCAAAGCAATTCAGAC 140266 |||||||||||||||| | ||| || || ||||||||||||||| |||||||||||||| Sbjct 642 ATTGAGATTGACTTAAGCATAAATGAGATTGTTTCATATTACGGTGAAAGCAATTCAGAC 583 Query 140267 CGTGACAGTTTAAACACATTAGTAGATTGCTTAGGGATTGCACCAAACTTTAGATACCTA 140326 |||||||||||||||||| | ||| |||||||||| ||||| ||||||||||||||| || Sbjct 582 CGTGACAGTTTAAACACACTTGTATATTGCTTAGGAATTGCGCCAAACTTTAGATACTTA 523 Query 140327 CCAAGCAAAGACTTATTCATTTACGAAAATTAATTAAATAAAGGGCTTGACTTCCAAGCC 140386 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 CCAAGCAAAAACTTATTCATTTACGAAAATTAATTAAATAAAGGGCTTGACTTCCAAGCC 463 Query 140387 CTAGCATGTTATTATTAAGAT---AGTTAAAAAAT-------ACAAATCA----GAAAAG 140432 ||| |||||||||||||| | || ||| || ||||| | |||||| Sbjct 462 CTACCATGTTATTATTAAATTGTAAGGTAATCAAGCACAACGACAAAATAAACTGAAAAG 403 Query 140433 GAAATGATGACAATGTTCAAATTACAAAATAAAGTTGAGATAATCGTACCTAAGGAAGAT 140492 ||| |||||| |||||||||||||||||||||||| || || |||||||||||||||||| Sbjct 402 GAATTGATGAAAATGTTCAAATTACAAAATAAAGTGGAAATTATCGTACCTAAGGAAGAT 343 Query 140493 AACAACGGTAAACACATCATGAACAATCAATTGAATGAATCACACAAAACAATCACTAGA 140552 |||||||| | || |||| | | || |||| || | ||||| | Sbjct 342 AACAACGGCGTTGAGATTGCAGACAAACGTATTAAAGAATAGTTAAATAGCATCACAATG 283 Query 140553 ATATGTGGAGGTTGTACAATCACTGATGTTAAAGGTCAGTGGTGGTCAGACGATGAGCAA 140612 | || |||||||| || || || ||||||| || |||| ||||| ||||| || Sbjct 282 GAAGCGGGCGGTTGTACTATTACAGAAATTAAAGGGCAATGGTACTCAGAAGATGAAAAA 223 Query 140613 CGTATCATGCAAGATAATAACACTAATTACGAATGGTACTAT 140654 ||||| ||| ||||||| ||| ||| || ||||| ||| Sbjct 222 CGTATAATGGAAGATAACAACTTAAATCTTGAGTGGTATTAT 181 >seq3308 Length=2910 Score = 655 bits (726), Expect = 0.0 Identities = 462/528 (88%), Gaps = 11/528 (2%) Strand=Plus/Minus Query 141722 AAGCGGTTGACAAACTAACCGCTTCATGATAATATTAAACTATACTAAAGAAAAGGAAAT 141781 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2663 AAGCTGTTGACAAACTAACCGCTTCATGATAATATTAAACTATACTAAAGAAAAGGTAAT 2604 Query 141782 GATGACAATGACAAAAACAATTAAACAATTAGAAAGCCAACTTGAAAGACTAGAAAGAAA 141841 || ||||||||||||||||| ||||||||||||||| || | || || ||||||||||| Sbjct 2603 AATTACAATGACAAAAACAATCAAACAATTAGAAAGCTAATTAGAGAGTCTAGAAAGAAA 2544 Query 141842 ATCAGATGAGGAACTAGCAAACGGATATTATGAAGCCTTTGAAAGAACTTGCGCACAGAT 141901 ||||||||||||| ||||||||||||| ||||| |||||||||||||| |||||||| Sbjct 2543 ATCAGATGAGGAATTAGCAAACGGATACTATGACAGATTTGAAAGAACTTGTGCACAGAT 2484 Query 141902 TAGAGAATTAGACCTACAAATCGAATTAAAAAAGAATTCAGAAACTGTTTaaaaaaaTTA 141961 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2483 TAGAGAATTAGACCTACAAATCGAATTAAAAAAGAACTCAGAAACTGTTTAAAAAAATCT 2424 Query 141962 AAATAAGGGGTTGACATTTAGCCCCTTAGATGTTATTATTAATATAT------ACTA--- 142012 |||||||||||||||| ||| ||||||| |||||| |||||| |||| | || Sbjct 2423 AAATAAGGGGTTGACACTTAACCCCTTACATGTTAATATTAAGATATTTAAAAAATACAA 2364 Query 142013 --AAGAAAAGGAATTGATAAACATGAAATTATTAAACCAAGAAAACCAAATCGTAATTAG 142070 ||||||||||||||||| | ||||||||| | || ||| || ||||||||||||| Sbjct 2363 ATAAGAAAAGGAATTGATACAAATGAAATTAATCAATAGAGATAATGAAATCGTAATTAG 2304 Query 142071 CATAGCAACACTTGAGAGCGTAAAACAAGCCCTAATTTGGGAGTACATCGACCACTTAGA 142130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2303 CATAGCAACACTTGAGAGCGTAAAACAAGCCCTAATTTGGGAGTACATCGACCACTTAGA 2244 Query 142131 TAATAACATTCTAGGCAATAAAATCTATGACACAGAAGCGGTTGTCGTTACTTCTGAGAC 142190 ||||||||| |||| || |||||| || ||| |||||||||||| || |||||||| || Sbjct 2243 TAATAACATCCTAGACAGTAAAATTTACGACCAAGAAGCGGTTGTGGTGACTTCTGACAC 2184 Query 142191 TCTACAGACAATCAAATTTGCAGAGACTATAGAAGACCTGCAGGAATA 142238 ||||||| ||||||||||||| || ||||| |||| || | ||||| Sbjct 2183 TCTACAGTCAATCAAATTTGCGGACACTATGGAAGGACTAGAAGAATA 2136 Score = 641 bits (710), Expect = 4e-179 Identities = 460/545 (84%), Gaps = 9/545 (2%) Strand=Plus/Minus Query 561 AGGAGATGTTGAACATGAACACAAGAAGGGTAAACAAAGCGTTAAACGAAGCAGTTAGAT 620 ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| ||| Sbjct 585 AGGAGATGTAAAACATGAATACAAGAAGGGTAAACAAAGCGTTAAACGAAGCGGTTCGAT 526 Query 621 TATTAGACAAGCAAATAGCAGACACACAGAAAACAATGCAGGAGTTAAATAACCAAC--- 677 ||||||| |||||||||||||||| || || || ||||||||||| ||||| |||| Sbjct 525 TATTAGATGAGCAAATAGCAGACACTCAAAAGACTATGCAGGAGTTGAATAAACAACTCG 466 Query 678 ------AGATAAGAGCTAAGCAGGAGCTAATGACATTAGTTGATACTATGACTGGTGATG 731 | |||| |||||||| |||||||||| |||||||||| |||||||||||||| Sbjct 465 AGAAGCAAATAAAGGCTAAGCAAGAGCTAATGATATTAGTTGATGTTATGACTGGTGATG 406 Query 732 ATGAGTAATGAACATTAGAGAGGTTCATAATGTCGTTAAGAGTGCAAAGAGCCAACTCCT 791 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 405 ATGAGTAATGAGCATTAGAGAGGTTCATAATGTCGTTAAGAGTGCAAAGAGCAAACTCCT 346 Query 792 GCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGACTACATCACAGAGGAGCTTCA 851 ||| |||||||||||||||||| ||||| || Sbjct 345 GCAGGAACATAATAATATTAATAATGTAATCATAGATGACTACATCACAGAAGAGCTACA 286 Query 852 CAGACGCACACAGAGAAGCGGGACAATACAGATGAACAATAACACCGCTTCATATAGTAA 911 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 285 CAGACGCACACAGGGAAGCGGAACAATACAGATGAACAATAACACCGCTTCATATAGTAA 226 Query 912 TGGCTCATATGGTAGCTTAGAAGAGNNNNNNNNNNNNTATGACCTATCTTCATTATCTAC 971 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 225 TGGCTCATATGGTAGCTTAGAAGAGCTTAGAGAAGCTTATGACCTATCTTCATTATCTAC 166 Query 972 TGGTGAGATTAAAGAGCTGATAAAAACATTTGTTTAAATTCTTTTATCAAAACGCTTTAC 1031 || ||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||| Sbjct 165 TGAGGAGATTAAAGAACTAATACAAACATTTGTTTAAATTATTTTATCAAAACGCTTTAC 106 Query 1032 AATCTTTTAGTTTGTATGATATAATGAACTTAACAAATTAAAAGAAAAGGAAATGATGAA 1091 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 AATATTTTAATTTGTATGATATAATGAACTTAACAAATTAAAAGAAAAGGAAATGATGAA 46 Query 1092 CATGA 1096 ||||| Sbjct 45 CATGA 41 Score = 412 bits (456), Expect = 3e-110 Identities = 443/586 (76%), Gaps = 34/586 (6%) Strand=Plus/Minus Query 1 GGATTTGATTATAATGACAAACACAATAAAAGGATTTTTACAAACAGAAGAAGCAAGCAC 60 |||||||||||| |||||||| |||||| ||| |||||||||| | ||||||||||||| Sbjct 1715 GGATTTGATTATTATGACAAATACAATACAAGCATTTTTACAAGGACAAGAAGCAAGCAC 1656 Query 61 AGTTAAGGACGTAGCAACTCACGGAGTGCAAAGCGGAGCAATTGGCAGATTAATTTACAC 120 ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| Sbjct 1655 AGTTAAGGACGTAGCAACTCATGGAGTACAAAGCGGAGCAATTGGCAAATTAATCTACAC 1596 Query 121 ATCAGACGTAGTAAACTTTTTTGACCGATACGAGCAGGATATTACAGACGTTATCACTAA 180 ||||||| |||||||||| ||||| ||||||||||||| ||| || ||| |||||| | Sbjct 1595 ATCAGACATAGTAAACTTCTTTGATAGATACGAGCAGGACATTGAAGCCGTCATCACTGA 1536 Query 181 CTACTTAGAAGGTGTTACAGGCGCTCAGTATTATGACTTGTTAGACTATGAACTAATGAG 240 ||| | |||| ||||| || || ||||||||||| || ||||||| || ||||| Sbjct 1535 ATACATTGAAGAGGTTACGGGACAACAATATTATGACTTATTGAACTATGAGCTTATGAG 1476 Query 241 TGACCTCGAGAACTATGCAAATGTAAACTTTCAACATGAAGATACTTATAGAGAAATTGA 300 ||||||||||| |||||||||||| | ||| || | ||||| |||| | ||| | Sbjct 1475 AGACCTCGAGAATTATGCAAATGTAGAATTTGAAGACGAAGACGAATATAATAACATTCA 1416 Query 301 ATTCGAACTAGCAGAGGGTATTGCTTCTCGAT----ATGCAGGTTTTGACGAAGAAGATG 356 ||| || |||||||| ||||||||| ||| || ||| ||||| || || | Sbjct 1415 ATTTGACCTAGCAGAAAACATTGCTTCT-GATGAGGTTGAAGGATTTGAAGACATGGACG 1357 Query 357 AAGACATA-CAACAAGACTTAATTTTTGAAGCATTAGACTATGTTGAAATGGATATTCAA 415 ||| || | || || ||| | ||| || | || |||||||| | || | ||| Sbjct 1356 AAG-CAGACCAGGCGGAAGCAATCTATGAGGCTATGGATGATGTTGAATTAGAACTACAA 1298 Query 416 GACATTGACAAAGTGCAGTTTGTTAACTTAGCAGTTGAGATTGTAGCACAGGAATTAGCA 475 || | ||||| || || | |||||| |||| |||||||||||||| | Sbjct 1297 GAAACGGACAAGGTTCAATATGTTAATCTAGCGGTTGAGATTGTAGCGC----------- 1249 Query 476 GGAGAAAGAGGAGACATCTAAGACCCTGCAGAAAGCACATAG--AGACACACAGAGAAGC 533 ||||| | | | || || ||||||| || | |||||||||||||| Sbjct 1248 ----AAAGA----------ATGGCACTATAGGAAGCACACAGACACACACACAGAGAAGC 1203 Query 534 TTAACCGCTTCTCTAATACAATTAATCAGGAGATGTTGAACATGAA 579 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1202 TTAACCGCTTCTCTAATACAATTAATCAGGAGATGTTGAAGATGAA 1157 Score = 129 bits (142), Expect = 5e-25 Identities = 74/76 (97%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 141505 ATGAAGCAATTGAAGAATACGCATaaaaaaaCTTAATCAAAGGGGTTGACATTCAACCCC 141564 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2910 ATGAAGCAATCGAAGAATACGCATAAAAAAACTTAATAAAAGGGGTTGACATTCAACCCC 2851 Query 141565 TACCATGTTAATATTA 141580 |||||||||||||||| Sbjct 2850 TACCATGTTAATATTA 2835 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 141952 aaaaaaaTTAAAATAAGGGGTTGACATTTAGCCCCTTAGATGTTATTATTAATATATACT 142011 |||||| |||| | |||||||||||||| | ||||| |||||| ||||||||||||| Sbjct 2885 AAAAAACTTAATAAAAGGGGTTGACATTCAACCCCTACCATGTTAATATTAATATATACC 2826 Query 142012 AAAGAAAAGGAATTGATAAACATGAAAT 142039 ||| | |||||||||||| |||| || Sbjct 2825 AAATGAGAGGAATTGATAATTATGAGAT 2798 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/120 (78%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 140361 TAAATAAAGGGCTTGACTTCCAAGCCCTAGCATGTTATTATTAAGATAGTTAAAAAATAC 140420 ||||||| ||| ||||| || |||| ||||||| |||||||||| ||||||||||| Sbjct 2424 TAAATAAGGGG-TTGACACTTAACCCCTTACATGTTAATATTAAGATATTTAAAAAATAC 2366 Query 140421 AAATCAGAAAAGGAAATGATGACAATGTTCAAATTACAAAATAAAGTTGAGATAATCGTA 140480 |||| |||||||||| |||| |||| | |||||| |||| || | | ||||||| Sbjct 2365 AAATAAGAAAAGGAATTGAT-ACAA--ATGAAATTAATCAATAGAGATAATGAAATCGTA 2309 >seq2836 Length=4769 Score = 627 bits (694), Expect = 8e-175 Identities = 414/471 (88%), Gaps = 2/471 (0%) Strand=Plus/Minus Query 136581 CAAAAATAAATACACTAGGA-TATTATTCCTAGTGTATTATATAAtttttttATAGAATA 136639 |||||| |||||||| |||| ||||||||| |||||||| |||||||||||||||||||| Sbjct 1756 CAAAAAAAAATACACCAGGAATATTATTCCCAGTGTATTGTATAATTTTTTTATAGAATA 1697 Query 136640 TTTATAACATTGTATTCAAATTCATTTACTTCATGTTGTGatttaattaaatttttaatt 136699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696 TTTATAACATTGTATTCAAATTCATTTACTTCATGTTGTGATTTAATTAAATTTTTAATT 1637 Query 136700 aatccgttttgtgttttatactcttttactagtttttcnnnnnnnnnNNNNNNNNNNNNN 136759 |||||||||||||||||||| ||||||||||||||||| Sbjct 1636 AATCCGTTTTGTGTTTTATAGTCTTTTACTAGTTTTTCATTTTCTATAATTAAATTATTA 1577 Query 136760 NNNNNNNNNNNNNNNNNNNCCTCATCTACATAAAATTTACTTTCATATATTTCATAATAT 136819 ||||||||||||||||||||||||||||||||||||||||| Sbjct 1576 AATTCTTCTTTTGTTGTATCCTCATCTACATAAAATTTACTTTCATATATTTCATAATAT 1517 Query 136820 TTTTTATCTGTTCCGCCATCTAAATCATCTGATATTTGATAATTTTTGAATACAATTTCT 136879 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1516 TTTTTATCTGTTCCGTTATCAATATCATCTGATATTTGATAATTTTTGAATACAATTTCT 1457 Query 136880 TTTGTTTCTAATTCATTTACTAATAATTGTGATTTTGCATATTGTAATACGTCTTCATTG 136939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 TTTGTTTCTAATTCATTTACTAATAATTGTGATTTTGCATATTGTAATACGTCTTCATTG 1397 Query 136940 TCCCACATTGGAATATAGTTTATTTTCATTTAAATCAAATCCTTTTCTTATAATTTTTNN 136999 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1396 TCCCACATTGGAATATAGTTTATTTTCATTTAAATCAAATCCTTTTC-TATAATTTTTTT 1338 Query 137000 ANNTAATATTTGTAGAAGCGGTTGGGGTTTGTCCCTTGCCTTACTACACTT 137050 | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1337 ATATAATATTTGTAGAAGCGGTTGGGGTTTGTCCCTTGCCTTACTACCCTT 1287 Score = 457 bits (506), Expect = 8e-124 Identities = 435/553 (79%), Gaps = 10/553 (2%) Strand=Plus/Minus Query 135172 AAAGGAGAGAT-ATAATGATAGAGATATACCTTAGTGAAAATTATGATAAGAATTTATTA 135230 ||||||||||| ||||||||||| ||||| || ||| |||| ||||||||| |||| | Sbjct 3478 AAAGGAGAGATTATAATGATAGAAATATATCTCAGTAAAAACTATGATAAGGATTTGCTC 3419 Query 135231 AAAGCAGAATTAAAATGGATTAAGGAGACCGCTTCAAGAGAACTAACTTATGATATTAAT 135290 ||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 3418 AAAGCAGAATTGAAGTGGATTAAAGAGACCGCTTCAAGAGAACTAACTTATGATGTTAAT 3359 Query 135291 AGGAAACCTGGATTGGATGTTTATGTTAATCCCTATAGGTGTACTAAAGACGAAGTTGAA 135350 || | || ||||| ||||| || ||| ||| | ||| | ||| || || || |||||| Sbjct 3358 AGAAGCCCAGGATTAGATGTACATATTAGTCCTTTTAGATATACCAAGGATGAGGTTGAA 3299 Query 135351 GAATGGAGTACACTTCCTCCATTTGAAGATGATATACTTGTATTTATAGCGGAGACGTGG 135410 ||| ||| || ||||| |||||||||||| || |||||||||||| || || ||| Sbjct 3298 GAAATGAGCTTACATCCTCAGTTTGAAGATGATGTATGTGTATTTATAGCTGAAACATGG 3239 Query 135411 ATACATGAATACCATAGAGGTAAATCAATAGGTGTAGATAGTATGGAAGAGTATGTAAAG 135470 |||||||| || | || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 3238 ATACATGAGTATCGTAATGGTAAATCAATAGGTGTAGATAGTATGGAAGAATATGTAAAG 3179 Query 135471 GAGATGTAAGTAATGTTTAAAGTATATTATACAGTCTACCATAGAGGTAGTATGAAAACA 135530 ||||||||| ||||| | || ||||||||||| || |||| |||||||||||| Sbjct 3178 GAGATGTAATTAATGGTAGAAACTTATTATACAGTATATCATAAGAATAGTATGAAAACT 3119 Query 135531 ATTAAGGATAAGCTAGATAGAAGTAGTTTAATATACTTCTTGTATGACACTTGGTATAAA 135590 ||||||||| | || ||||||| |||||| ||||||| ||| | |||||| |||| Sbjct 3118 ATTAAGGATTACTTAAGTAGAAGTGATTTAATTGACTTCTTATATAAGACTTGGCATAAG 3059 Query 135591 GATATTAGTAACGTATTCCCTAATCACTATAATAAAGAGTTTGGGAGTAA---GAGTGAT 135647 ||||| ||||| ||| ||| | | |||| || || || | || || Sbjct 3058 GATATAAGTAATATATACCCAACAGATTATACTA---CGTATGAAACAAAATTCTGTATA 3002 Query 135648 GATATAGATATAGATAAACTTATTGAAGCGGTTAATGAGGAAGGTATATTACTTATCAAT 135707 || |||||| ||| || ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 3001 GACATAGATGTAGTTAGACTAATTGAAGCGGTTAATGAAGAAGGTGTATTACTTATCAA- 2943 Query 135708 AGAGGTAATTATG 135720 ||||||||| Sbjct 2942 --CCGTAATTATG 2932 Score = 435 bits (482), Expect = 3e-117 Identities = 306/348 (88%), Gaps = 6/348 (2%) Strand=Plus/Minus Query 137310 TGGAGTTGTGGCAAATGGATGGTTACAGATGTGCAGAACCTCCATTATATGAAAGCACAC 137369 ||||||||| ||||||||| || ||||||||| ||||||| | |||||||||||||||| Sbjct 377 TGGAGTTGTTGCAAATGGACGGATACAGATGTACAGAACCGCAATTATATGAAAGCACAT 318 Query 137370 TAAACCACACACGCACATACACGGCGTTAATTGTTTCCATTAAAGGAAACTATGACACAG 137429 ||||||||||||||||||| ||||| ||||| || |||||| |||||||||||||| | Sbjct 317 TAAACCACACACGCACATATACGGCTTTAATCGTAAGCATTAAGGGAAACTATGACACTG 258 Query 137430 TGCAGATGTTCCGTAAAACGCCTATAATGAGCATGAGAGGGCAAAGCCAACCGGCTAGCA 137489 | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 257 TTCAAATGTTCCGTAAAACGCCTATAATGAGCATGAGAGGGCAAGCGCAACCGGCTAGCA 198 Query 137490 TGTTAGTAAATGTTATTGATGATGTAATTATAATCGTATATGAAAATGTAGTGTACGGAG 137549 ||||||||||||| |||||||| || ||||||||||||||||||||| || ||||| | Sbjct 197 TGTTAGTAAATGTAATTGATGACGTGATTATAATCGTATATGAAAATACGGTTTACGGGG 138 Query 137550 TTCAAAACAAAGAAATAAAATTTATTGAAGAAATTTAAAAATAGGGGTTGCAAT---CCT 137606 | || || |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 137 TACAGAATAAAGAAATAAAATTTATTGAAGAAATTTAAAAATAGGGGTTGCAATACCCCT 78 Query 137607 CAAGCATCTATAGTAATATAATAGGTGTAGGGGATAGCAACACACCTT 137654 ||| | |||||||||||||| |||| |||||||||||||||||| Sbjct 77 TAAGA---TGTAGTAATATAATAGATGTAAGGGATAGCAACACACCTT 33 Score = 416 bits (460), Expect = 3e-111 Identities = 357/440 (81%), Gaps = 1/440 (0%) Strand=Plus/Minus Query 134553 AAAGGAGAGAT-ATAATGATAGAGATATACCTTAGTGAAAATTATGATAAGAATTTATTA 134611 ||||||||||| ||||||||||| ||||| || ||| |||| ||||||||| |||| | Sbjct 3478 AAAGGAGAGATTATAATGATAGAAATATATCTCAGTAAAAACTATGATAAGGATTTGCTC 3419 Query 134612 AAAGCAGAATTAAAATGGATTAAGGAGACCGCTTCAAGAGAACTAACTTATGATATTAAT 134671 ||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 3418 AAAGCAGAATTGAAGTGGATTAAAGAGACCGCTTCAAGAGAACTAACTTATGATGTTAAT 3359 Query 134672 AGGAAACCTGGATTGGATGTTTATGTTAATCCCTATAGGTGTACTAAAGACGAAGTTGAA 134731 || | || ||||| ||||| || ||| ||| | ||| | ||| || || || |||||| Sbjct 3358 AGAAGCCCAGGATTAGATGTACATATTAGTCCTTTTAGATATACCAAGGATGAGGTTGAA 3299 Query 134732 GAATGGAGTACACTTCCTCCATTTGAAGATGATATACTTGTATTTATAGCGGAGACGTGG 134791 ||| ||| || ||||| |||||||||||| || |||||||||||| || || ||| Sbjct 3298 GAAATGAGCTTACATCCTCAGTTTGAAGATGATGTATGTGTATTTATAGCTGAAACATGG 3239 Query 134792 ATACATGAATACCATAGAGGTAAATCAATAGGTGTAGATAGTATGGAAGAGTATGTAAAG 134851 |||||||| || | || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 3238 ATACATGAGTATCGTAATGGTAAATCAATAGGTGTAGATAGTATGGAAGAATATGTAAAG 3179 Query 134852 GAGATGTAAGTAATGTTTAAAGTATATTATACAGTCTACCATAGAGGTAGTATGAAAACA 134911 ||||||||| ||||| | || ||||||||||| || |||| |||||||||||| Sbjct 3178 GAGATGTAATTAATGGTAGAAACTTATTATACAGTATATCATAAGAATAGTATGAAAACT 3119 Query 134912 ATTAAGGATAAGCTAGATAGAAGTAGTTTAATATACTTCTTGTATGACACTTGGTATAAA 134971 ||||||||| | || ||||||| |||||| ||||||| ||| | |||||| |||| Sbjct 3118 ATTAAGGATTACTTAAGTAGAAGTGATTTAATTGACTTCTTATATAAGACTTGGCATAAG 3059 Query 134972 GATATTAGTAACGTATTCCC 134991 ||||| ||||| ||| ||| Sbjct 3058 GATATAAGTAATATATACCC 3039 Score = 300 bits (332), Expect = 1e-76 Identities = 198/217 (91%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 137062 GTATAGTTATTCAGAAGTCAATACTTTTGAGTAACttttttt-aaattcttttttcttct 137120 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 949 GTATAGTTATTCAGAAGTCACAACTTTTGAGTAACTTTTTTTTAAATTCTTTTTTCTTCT 890 Query 137121 atataatagtagtttttagccctaaaaatg--tttttaaaaGAATTTGCATTTTCTTATT 137178 |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 889 ATATAATAGTAGTTTTTAGCCCTAAAAAAAGTTTTTTAAAAGAATTTACATTTTCTTATT 830 Query 137179 GACTTTATTATCATATGGTAGTAATATAAAGGTACAGCAAGGGAACAGCAACAAGATATT 137238 ||||| | |||||||| ||||||||||||||||||||||| ||||||||||||| || | Sbjct 829 GACTTATTAATCATATGATAGTAATATAAAGGTACAGCAAGAGAACAGCAACAAGGTAGT 770 Query 137239 AGAATTATATaaaaaaaTTATTTAATTGGAGATGATT 137275 || |||||||| |||||||||| ||||||||| |||| Sbjct 769 AGCATTATATACAAAAATTATTCAATTGGAGACGATT 733 Score = 221 bits (244), Expect = 1e-52 Identities = 230/302 (76%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 133935 TATAATGATTCATATATTCTTAACTGAGAGTTATGATAATAAAGTTTTAAATACTGTACT 133994 |||||||||| ||||| |||||||| | |||||| || | |||||| | ||| | Sbjct 3754 TATAATGATTATAATATTTTTAACTGAAAAATATGATGCCAAGGCTTTAAAGAAAGTATT 3695 Query 133995 CAGGTATATTAATACTACTAGTGATAGAGAGCTTAGTTACTTAATGGGTAAAGGTGAAGC 134054 ||||| ||| | |||| |||| ||||| || |||||||| ||||| ||||| Sbjct 3694 AGAACATATTGATAATTGTAGTAGCAGAGGTCTTAGCTATTTAATGGGAAAAGGAGAAGC 3635 Query 134055 AGATGTATGTATAGAAAAGGGAGTATTTAGTAATATAGAAGATGTTAAAATTGACTCTGA 134114 |||||||||||||| ||| ||||| || | | ||| ||||| | ||| |||| | Sbjct 3634 GGATGTATGTATAGAGAAGAATGTATTCAGAGAAAGAGATGATGTAAGGATTAACTCAAA 3575 Query 134115 GTTTATTGATAGAGGTAACTTATGTATACTTATAAATGAAGATGGATTAGTATGTAGTTA 134174 |||||||| |||||| | |||||| | |||||| | |||| |||| |||||||| Sbjct 3574 CATTATTGATGAAGGTAAACTTTGTATATTAATAAATAGAAATGGTTTAGAGTGTAGTTA 3515 Query 134175 CTACAGAGGAGAATCATGTAATGTTGGTTCCTTTGTAAAGGAGAGGTTATAATGATAGAA 134234 ||| ||||| | |||||||||||| ||| |||||||||||||||| |||||||||||||| Sbjct 3514 CTATAGAGGTGTATCATGTAATGTGGGTGCCTTTGTAAAGGAGAGATTATAATGATAGAA 3455 Query 134235 AT 134236 || Sbjct 3454 AT 3453 Score = 194 bits (214), Expect = 2e-44 Identities = 172/214 (80%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 133812 TTAGCTATACTTGGAATATAGAGCTCATTTAAGAGGCGGTTAAGTAGTTAGAGGGGATTT 133871 |||||||||||||| || |||||||||||||||| |||||||||||||| | | || Sbjct 4168 TTAGCTATACTTGGCATTTAGAGCTCATTTAAGAAGCGGTTAAGTAGTTCATGATAAATT 4109 Query 133872 GTCCTA-AAATAGTATACCGCTTCTATATGGAAGGCTGAGAGGTCTTAGAATTGAAAGGA 133930 | ||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 4108 GGTCTAGAAATATATTACCGCTTCTCTATGGAAGGCTGAGAGGGCTTAGAATTGAAAGGA 4049 Query 133931 GAGATATAATGATTCATATATTCTTAACTGAGAGTTATGATAATAAAGTTTTAAATACTG 133990 |||||||||||||||||||||| ||| ||| |||| |||| || |||| | | Sbjct 4048 GAGATATAATGATTCATATATTTGTAAAAGAGGATTATAATAAAGAAACATTAAGGAGTT 3989 Query 133991 TACTCAGGTATATTAATACTACTAGTGATAGAGA 134024 |||| ||| |||||||||||| |||| ||| Sbjct 3988 TACTTGAGTACATTAATACTACTGTAGATAAAGA 3955 Score = 179 bits (198), Expect = 3e-40 Identities = 215/285 (75%), Gaps = 13/285 (5%) Strand=Plus/Minus Query 133179 TTTAATGTACTTAAAATCGTAAGTAGCTCC-TTATCATTTAGGGTTCTATAATTGAGAAT 133237 |||||||||| |||||| ||||||||| || |||||||||||| | ||||||||||||| Sbjct 4769 TTTAATGTACCTAAAATAGTAAGTAGCCCCCTTATCATTTAGGTCTGTATAATTGAGAAT 4710 Query 133238 ATTGAAAGATATCCGCTTCAATTACAATTAAGTGTTGACAATCATGAAGCGGTATGTTAT 133297 ||| |||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct 4709 ATTAGAAGATATCCGCTTCAATTACAATTAATTGTTGACAACTATGAAGCGGTCTGTTAT 4650 Query 133298 AATTAGGTATAGTCAAATTTAGGAGATGAGATAGATGATTGATATATACTTA-GGAGAAG 133356 | ||| ||||| | ||||||||| | ||||||||||| || ||| || | Sbjct 4649 ACTTA-GTATA-------TAAGGAGATGAATAATATGATTGATATTTATTTACACAGTA- 4599 Query 133357 GTTATAATAAAGAATACTT-GTCTAAAGCACTCAGATTAATCAATGACCATGCTCCTAGG 133415 | |||| |||||| | || | | | || | | ||| | || | ||||||| Sbjct 4598 GATATAGTAAAGATAAGTTAAAATTTATC-CTTAAAGCAATAAGGGATTTTTCTCCTAGA 4540 Query 133416 GAGTTAAGTTATGATTTTAATAATGTAGAAGCGGATGTTAATATT 133460 || |||| || ||||||| ||| | ||||||||||| |||| Sbjct 4539 GAATTAACCTACGATTTTAGAAATCCAAAAGCGGATGTTCGTATT 4495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455215775325120