Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_029080.1 Length=142096 Score E Sequences producing significant alignments: (Bits) Value seq3308 940 0.0 seq8440 809 0.0 seq2836 596 1e-165 >seq3308 Length=2910 Score = 940 bits (1042), Expect = 0.0 Identities = 569/610 (93%), Gaps = 12/610 (2%) Strand=Plus/Minus Query 7197 CCTAACATATAGATGGTAATATAAGAGTATAGNNNNNNNNNNNNNNNNNNNNGATTTGAT 7256 |||| ||||||||||||||||||||||||||| |||||||| Sbjct 1766 CCTAGCATATAGATGGTAATATAAGAGTATAGAAAAAATAAAAAAAGAAAAGGATTTGAT 1707 Query 7257 TATTATGACAAATACAATACAAGCATTTTTACAAGGACAAGAAGCAAGCACAGTTAAGGA 7316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1706 TATTATGACAAATACAATACAAGCATTTTTACAAGGACAAGAAGCAAGCACAGTTAAGGA 1647 Query 7317 CGTAGCAACTCATGGAGTACAAAGCGGAGCAATTGGCAAATTAATCTACACATCAGACGT 7376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1646 CGTAGCAACTCATGGAGTACAAAGCGGAGCAATTGGCAAATTAATCTACACATCAGACAT 1587 Query 7377 AGTAAACTTCTTTGATAGTTACGAGCAGGACATTGAAGCGGTCATCACTGAATACATTGA 7436 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1586 AGTAAACTTCTTTGATAGATACGAGCAGGACATTGAAGCCGTCATCACTGAATACATTGA 1527 Query 7437 AGAGGTTACAGGACAACAATATTATGACTTATTGAACTATGAGCTTATGAGAGACCTCGA 7496 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1526 AGAGGTTACGGGACAACAATATTATGACTTATTGAACTATGAGCTTATGAGAGACCTCGA 1467 Query 7497 GAATTATGCAAATGTAGAATTTGAAGACGAAGACGAATATAATAACATTCAATTTGACCT 7556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1466 GAATTATGCAAATGTAGAATTTGAAGACGAAGACGAATATAATAACATTCAATTTGACCT 1407 Query 7557 AGCAGAAAACATTGCTTCTGATGAGGTTGAAGGATTTGAAGACATGGACGAAGCAGACCG 7616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1406 AGCAGAAAACATTGCTTCTGATGAGGTTGAAGGATTTGAAGACATGGACGAAGCAGACCA 1347 Query 7617 GGCGGAAGCAATCTATGAGGCTATGGATGATGTTGAATTAGAACTACAAGAAACTGACAA 7676 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1346 GGCGGAAGCAATCTATGAGGCTATGGATGATGTTGAATTAGAACTACAAGAAACGGACAA 1287 Query 7677 GGTTCAATATGTTAATCTAGCGGTTGAGATTGTAGCTCAAAGAATGGCACTATAGAAAGC 7736 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1286 GGTTCAATATGTTAATCTAGCGGTTGAGATTGTAGCGCAAAGAATGGCACTATAGGAAGC 1227 Query 7737 ACA------------CAGAGAAGCTTAACCGCTTCTCTAATACAATTAATCAGGAGATGT 7784 ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1226 ACACAGACACACACACAGAGAAGCTTAACCGCTTCTCTAATACAATTAATCAGGAGATGT 1167 Query 7785 TGAAGATGAA 7794 |||||||||| Sbjct 1166 TGAAGATGAA 1157 Score = 699 bits (774), Expect = 0.0 Identities = 470/529 (89%), Gaps = 0/529 (0%) Strand=Plus/Minus Query 7776 AGGAGATGTTGAAGATGAATACAAGACGGGTAAACAGAGCGTTAAACGAAGCAGTTAGAT 7835 ||||||||| || |||||||||||| ||||||||| ||||||||||||||| ||| ||| Sbjct 585 AGGAGATGTAAAACATGAATACAAGAAGGGTAAACAAAGCGTTAAACGAAGCGGTTCGAT 526 Query 7836 TATTAGATGAACAAATAGCAGATACTCAAAAGACTATGCAGGAGTTGAATAAACAACTAG 7895 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 525 TATTAGATGAGCAAATAGCAGACACTCAAAAGACTATGCAGGAGTTGAATAAACAACTCG 466 Query 7896 AGAAGCAAATAAAGGCTAAGCAAGAGCTAATGGTATTAGTTGATGTTATGAATGGTGATG 7955 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 465 AGAAGCAAATAAAGGCTAAGCAAGAGCTAATGATATTAGTTGATGTTATGACTGGTGATG 406 Query 7956 ATGAGTAATGAACATTAGAGAGGTTCACAATGTCGTTAAGAGTGCTAAGAGCAAACTCCT 8015 ||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 405 ATGAGTAATGAGCATTAGAGAGGTTCATAATGTCGTTAAGAGTGCAAAGAGCAAACTCCT 346 Query 8016 GCAGGAGCAGGCTCACCCAACGGATAACCTCATAGAGCAGTACATCAATGATGAGCTACA 8075 |||||| || | | | || ||||||| | ||||||| || |||||||| Sbjct 345 GCAGGAACATAATAATATTAATAATGTAATCATAGATGACTACATCACAGAAGAGCTACA 286 Query 8076 CAGACGCACACAGAGAAGCGGAACAATACAGATGAACAATAATACTACTTCATATAGTAA 8135 ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||| Sbjct 285 CAGACGCACACAGGGAAGCGGAACAATACAGATGAACAATAACACCGCTTCATATAGTAA 226 Query 8136 TAGCCCATATGGTAGCTTAGAAGAGNNNNNNNNNNNTTATGACCTATCGTCATTATCTAC 8195 | || |||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 225 TGGCTCATATGGTAGCTTAGAAGAGCTTAGAGAAGCTTATGACCTATCTTCATTATCTAC 166 Query 8196 TGGTGAGATTAAAGAACTAATACAAACATTTGTTTAAATTATTTTATCAAAACGCTTTAC 8255 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 TGAGGAGATTAAAGAACTAATACAAACATTTGTTTAAATTATTTTATCAAAACGCTTTAC 106 Query 8256 AATCTTTTAGTTTGTATGATATAATGAACTTAACAAATTAAAAGAAAAG 8304 ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 105 AATATTTTAATTTGTATGATATAATGAACTTAACAAATTAAAAGAAAAG 57 Score = 333 bits (368), Expect = 2e-86 Identities = 257/304 (85%), Gaps = 15/304 (5%) Strand=Plus/Minus Query 6847 TAAATAAAGGGCTTGACTTTCAAGCCCTACCATGTTATTATTAAATTGTAAGGTAATCAA 6906 ||||||| ||| ||||| | || |||| ||||||| |||||| | || | || Sbjct 2424 TAAATAAGGGG-TTGACACTTAACCCCTTACATGTTAATATTAA-------GATATTTAA 2373 Query 6907 GCACAACGACAAAATAAACTGAAAAGGAATTGATACAAATGAAATTAATCAATAGAGATA 6966 | || |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2372 AAAATAC----AAATAA---GAAAAGGAATTGATACAAATGAAATTAATCAATAGAGATA 2320 Query 6967 ATGAAATCGTAATTAGCATAGCAACACTTGAGAGTGTAAAACAAGCCCTAATTTGGGAGT 7026 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2319 ATGAAATCGTAATTAGCATAGCAACACTTGAGAGCGTAAAACAAGCCCTAATTTGGGAGT 2260 Query 7027 ACATCGACCACTTAGATAATAACATCCTAGACAAAGAAATACATGACCAGGAAGCGGTTG 7086 ||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||| Sbjct 2259 ACATCGACCACTTAGATAATAACATCCTAGACAGTAAAATTTACGACCAAGAAGCGGTTG 2200 Query 7087 TTATTACTTCAGACACTTTGCAATCACTCAAATTTGCGGACACTATGGAAGAACTAGAAG 7146 | | ||||| |||||| | || ||| |||||||||||||||||||||||| |||||||| Sbjct 2199 TGGTGACTTCTGACACTCTACAGTCAATCAAATTTGCGGACACTATGGAAGGACTAGAAG 2140 Query 7147 AATA 7150 |||| Sbjct 2139 AATA 2136 >seq8440 Length=882 Score = 809 bits (896), Expect = 0.0 Identities = 482/504 (96%), Gaps = 3/504 (1%) Strand=Plus/Minus Query 6453 ATTGACAGTCACTTGAAACCATGATATTATTAAGATAACAAAAAACAAACAGAAAAGGAA 6512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 882 ATTGACAGTCACTTGAAACCATGATATTATTAAGATAACAAAAAACAAACAGAAAAGGAA 823 Query 6513 TTGATTATAATGAAATTTATCAAAACTATCGAAAACTTATTAACTAAAGCAGAAAACAAA 6572 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 822 TTGATTATAATGAAATTTATCAAAACTATCGAAAACTTATTAGAAAAAGCAGAAAACAAA 763 Query 6573 GGGCAAGCAATTTTAAACGGTCGTTATTATGACGGATATAGAAACGGTGAGCTTGAGGAA 6632 |||||||||||||||||||||||||| | |||||| ||||| || ||||||||||||||| Sbjct 762 GGGCAAGCAATTTTAAACGGTCGTTACTTTGACGGGTATAGCAAAGGTGAGCTTGAGGAA 703 Query 6633 AAATATGCAATCGAAATTGATGGCAACAAATTAATTATGCGTCATTGGGGTACACAAACA 6692 ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 702 AAATATGCAATTGAAATTGATGGCAACAAATTGATTATGCGTCACTGGGGTACACAAACA 643 Query 6693 ATTGAGATTGACTTAAGCATAAATGAAATTGTTTCATACTATGGTGAAAGCAATTCAGAC 6752 |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct 642 ATTGAGATTGACTTAAGCATAAATGAGATTGTTTCATATTACGGTGAAAGCAATTCAGAC 583 Query 6753 CGTGACAGTTTAAACACACTTGTATATTGCTTAGGAATTGCGCCAAACTTTAGATACTTA 6812 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 582 CGTGACAGTTTAAACACACTTGTATATTGCTTAGGAATTGCGCCAAACTTTAGATACTTA 523 Query 6813 CCAAGCAAAGACTTGTTCATTTACGAAAATTAATTAAATAAAGGGCTTGACTTTCAAGCC 6872 ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 522 CCAAGCAAAAACTTATTCATTTACGAAAATTAATTAAATAAAGGGCTTGACTTCCAAGCC 463 Query 6873 CTACCATGTTATTATTAAATTGTAAGGTAATCAAGCACAACGACAAAATAAACTGAAAAG 6932 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 462 CTACCATGTTATTATTAAATTGTAAGGTAATCAAGCACAACGACAAAATAAACTGAAAAG 403 Query 6933 GAATTGATACAAATG---AAATTA 6953 |||||||| ||||| |||||| Sbjct 402 GAATTGATGAAAATGTTCAAATTA 379 >seq2836 Length=4769 Score = 596 bits (660), Expect = 1e-165 Identities = 406/471 (86%), Gaps = 2/471 (0%) Strand=Plus/Minus Query 3284 CAAAAATAAATACACTAGGA-TATTATTCCCAGTGTATTATATAAtttttttATAGAATA 3342 |||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||| Sbjct 1756 CAAAAAAAAATACACCAGGAATATTATTCCCAGTGTATTGTATAATTTTTTTATAGAATA 1697 Query 3343 TTTATAACATTGTATTCAAATTCATTTACTTCATGTTGTGATTTAATTAAATTTTTAATT 3402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1696 TTTATAACATTGTATTCAAATTCATTTACTTCATGTTGTGATTTAATTAAATTTTTAATT 1637 Query 3403 AATCCGTTTTGTGTTTTATACTCTTTTATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN 3462 |||||||||||||||||||| ||||||| ||| Sbjct 1636 AATCCGTTTTGTGTTTTATAGTCTTTTACTAGTTTTTCATTTTCTATAATTAAATTATTA 1577 Query 3463 NNNNNNNNNNNNNNNNNNNCCTCATCTACATAAAATTTACTTTCATATATTTCATAATAT 3522 ||||||||||||||||||||||||||||||||||||||||| Sbjct 1576 AATTCTTCTTTTGTTGTATCCTCATCTACATAAAATTTACTTTCATATATTTCATAATAT 1517 Query 3523 TTTTTATCTGTTCCGCCATCTAAATCATCTGATatttgataatttttgaatataatttct 3582 ||||||||||||||| ||| | ||||||||||||||||||||||||||||| ||||||| Sbjct 1516 TTTTTATCTGTTCCGTTATCAATATCATCTGATATTTGATAATTTTTGAATACAATTTCT 1457 Query 3583 tttgtttctaattcatttactaataattgtgattttgCATATTGTAATACATCTTCATTG 3642 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1456 TTTGTTTCTAATTCATTTACTAATAATTGTGATTTTGCATATTGTAATACGTCTTCATTG 1397 Query 3643 TCCCACATTGGAATATAGTTTATTTTCATTTAAATCAAATCCTTTTCTTATAATTTTTNN 3702 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1396 TCCCACATTGGAATATAGTTTATTTTCATTTAAATCAAATCCTTTTC-TATAATTTTTTT 1338 Query 3703 ANNTAATATTTGTAGAAGCGGTTGGGGTTTGTCCCTTGCCTTACTACACTT 3753 | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1337 ATATAATATTTGTAGAAGCGGTTGGGGTTTGTCCCTTGCCTTACTACCCTT 1287 Score = 479 bits (530), Expect = 3e-130 Identities = 439/553 (79%), Gaps = 9/553 (2%) Strand=Plus/Minus Query 1880 AAAGGAGAGATTATAATGATAGAGATATACCTTAGTGAAAATTATGATAAGAATTTACTA 1939 ||||||||||||||||||||||| ||||| || ||| |||| ||||||||| |||| || Sbjct 3478 AAAGGAGAGATTATAATGATAGAAATATATCTCAGTAAAAACTATGATAAGGATTTGCTC 3419 Query 1940 AAAGCAGAATTAAAATGGATTAAAGAGACCGCTTCAAGAGAACTAACTTATGATATTAAT 1999 ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3418 AAAGCAGAATTGAAGTGGATTAAAGAGACCGCTTCAAGAGAACTAACTTATGATGTTAAT 3359 Query 2000 AGGAAACCTGGATTGGATGTTTATGTTAATCCCTATAGGTGTACTAAAGACGAAGTTGAA 2059 || | || ||||| ||||| || ||| ||| | ||| | ||| || || || |||||| Sbjct 3358 AGAAGCCCAGGATTAGATGTACATATTAGTCCTTTTAGATATACCAAGGATGAGGTTGAA 3299 Query 2060 GAATGGAGTACACTTCCTCCATTTGAAGATGATATACTTGTATTTATAGCGGAGACGTGG 2119 ||| ||| || ||||| |||||||||||| || |||||||||||| || || ||| Sbjct 3298 GAAATGAGCTTACATCCTCAGTTTGAAGATGATGTATGTGTATTTATAGCTGAAACATGG 3239 Query 2120 ATACATGAATATCTTAAGGGTGAATCAATAGGTGTAGATAGTATGGAAGAGTATGTAAAG 2179 |||||||| |||| ||| ||| |||||||||||||||||||||||||||| ||||||||| Sbjct 3238 ATACATGAGTATCGTAATGGTAAATCAATAGGTGTAGATAGTATGGAAGAATATGTAAAG 3179 Query 2180 GAGATGTAACTAATGTTTAAGGTATATTATACAGTCTACCATAGAGGTAGTATGAAAACT 2239 ||||||||| ||||| | | ||||||||||| || |||| ||||||||||||| Sbjct 3178 GAGATGTAATTAATGGTAGAAACTTATTATACAGTATATCATAAGAATAGTATGAAAACT 3119 Query 2240 ATTAAGGATAAGCTAGATAGAAGTAGTTTAATATACTTCTTGTATGATACTTGGTATAAA 2299 ||||||||| | || ||||||| |||||| ||||||| ||| | |||||| |||| Sbjct 3118 ATTAAGGATTACTTAAGTAGAAGTGATTTAATTGACTTCTTATATAAGACTTGGCATAAG 3059 Query 2300 GATATTAGTAACGTATTCCCTAATCACTATAATAAAGAGTTTGGGAGTAA---GAGTGAT 2356 ||||| ||||| ||| ||| | | |||| || || || | || || Sbjct 3058 GATATAAGTAATATATACCCAACAGATTATACTA---CGTATGAAACAAAATTCTGTATA 3002 Query 2357 GATATAGATATAGATAAACTTATTGAAGCGGTTAATGAGGAAGGTATATTACTTATCAAT 2416 || |||||| ||| || ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 3001 GACATAGATGTAGTTAGACTAATTGAAGCGGTTAATGAAGAAGGTGTATTACTTATCAA- 2943 Query 2417 AGAGGTAATTATG 2429 ||||||||| Sbjct 2942 --CCGTAATTATG 2932 Score = 381 bits (422), Expect = 5e-101 Identities = 291/347 (84%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 4013 TGGAGTTGTGGCAAATGGACGGCTACAGATGTGCAGAACCTCCATTATATGAAAGCACAC 4072 ||||||||| |||||||||||| ||||||||| ||||||| | |||||||||||||||| Sbjct 377 TGGAGTTGTTGCAAATGGACGGATACAGATGTACAGAACCGCAATTATATGAAAGCACAT 318 Query 4073 TAAACCACANNNNNNNNNNNNCGGCGTTAATTGTTTCTATTAATGGAAACTATGACACAG 4132 ||||||||| |||| ||||| || ||||| |||||||||||||| | Sbjct 317 TAAACCACACACGCACATATACGGCTTTAATCGTAAGCATTAAGGGAAACTATGACACTG 258 Query 4133 TGCAGATGTTCCGCAAAACGCCTATAATGAGCATGAGAGGGCAAAGCCAACCGGCTAGCA 4192 | || |||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 257 TTCAAATGTTCCGTAAAACGCCTATAATGAGCATGAGAGGGCAAGCGCAACCGGCTAGCA 198 Query 4193 TGTTAGTTAATGTGATTGACGATGTAATTATAATCGTATATGAAAATGTAGTGTACGGAG 4252 ||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||| | Sbjct 197 TGTTAGTAAATGTAATTGATGACGTGATTATAATCGTATATGAAAATACGGTTTACGGGG 138 Query 4253 TTCAAAACAAAGAAATAAAATTTATTGAAGAAATTTAAAAATAGGGGTTGCAAT---CCT 4309 | || || |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 137 TACAGAATAAAGAAATAAAATTTATTGAAGAAATTTAAAAATAGGGGTTGCAATACCCCT 78 Query 4310 CAAGCATCTATAGTAATATAATAGGTGTAGGGGATAGCAACACACCT 4356 ||| | |||||||||||||| |||| ||||||||||||||||| Sbjct 77 TAAGA---TGTAGTAATATAATAGATGTAAGGGATAGCAACACACCT 34 Score = 295 bits (326), Expect = 6e-75 Identities = 197/217 (91%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 3765 GTATAGTTATTCAGAAGTCAATACTTTTGAGTAACttttttt-aaattcttttttcttct 3823 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 949 GTATAGTTATTCAGAAGTCACAACTTTTGAGTAACTTTTTTTTAAATTCTTTTTTCTTCT 890 Query 3824 atataatagtagtttttagccctaaaaatg--tttttaaaaGAATTTGCATTTTCTTATT 3881 |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 889 ATATAATAGTAGTTTTTAGCCCTAAAAAAAGTTTTTTAAAAGAATTTACATTTTCTTATT 830 Query 3882 GACTTTATTATCATATGGTAGTAATATAAAGGTACAGCAAGGGAACAGCAACAAGATATT 3941 ||||| | |||||||| ||||||||||||||||||||||| ||||||||||||| || | Sbjct 829 GACTTATTAATCATATGATAGTAATATAAAGGTACAGCAAGAGAACAGCAACAAGGTAGT 770 Query 3942 AGAATTATATaaaaaaaTTATTTAATTTGAGATGATT 3978 || |||||||| |||||||||| |||| |||| |||| Sbjct 769 AGCATTATATACAAAAATTATTCAATTGGAGACGATT 733 Score = 233 bits (258), Expect = 2e-56 Identities = 233/302 (77%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 1262 TATAATGATTCATATATTTTTAACTGATAGTTATGATAATAAAGTTTTAAATACTGTACT 1321 |||||||||| |||||||||||||| | |||||| || | |||||| | ||| | Sbjct 3754 TATAATGATTATAATATTTTTAACTGAAAAATATGATGCCAAGGCTTTAAAGAAAGTATT 3695 Query 1322 CAGATATATTAATACTACTAGTGATAGAGAGCTTAGTTACTTAATGGGTAAAGGTGAAGC 1381 | ||||| ||| | |||| |||| ||||| || |||||||| ||||| ||||| Sbjct 3694 AGAACATATTGATAATTGTAGTAGCAGAGGTCTTAGCTATTTAATGGGAAAAGGAGAAGC 3635 Query 1382 GGATGTATGTATAGAAAAGGGAGTATTTAGTAATATAGAAGATGTTAAAATTGACTCTGA 1441 ||||||||||||||| ||| ||||| || | | ||| ||||| | ||| |||| | Sbjct 3634 GGATGTATGTATAGAGAAGAATGTATTCAGAGAAAGAGATGATGTAAGGATTAACTCAAA 3575 Query 1442 GTTTATTGATAGAGGTAACTTATGTATACTTATAAATGAAGATGGATTAGTATGTAGTTA 1501 |||||||| |||||| | |||||| | |||||| | |||| |||| |||||||| Sbjct 3574 CATTATTGATGAAGGTAAACTTTGTATATTAATAAATAGAAATGGTTTAGAGTGTAGTTA 3515 Query 1502 CTACAGAGGAGAATCATGTAATGTTGGTTCCTTTGTAAAGGAGAGGTTATAATGATAGAA 1561 ||| ||||| | |||||||||||| ||| |||||||||||||||| |||||||||||||| Sbjct 3514 CTATAGAGGTGTATCATGTAATGTGGGTGCCTTTGTAAAGGAGAGATTATAATGATAGAA 3455 Query 1562 AT 1563 || Sbjct 3454 AT 3453 Score = 194 bits (214), Expect = 2e-44 Identities = 172/214 (80%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 1139 TTAGCTATACTTGGAATATAGAGCTCATTTAAGAAGCGGTTAAGTAGTTAGAGGGGATTT 1198 |||||||||||||| || ||||||||||||||||||||||||||||||| | | || Sbjct 4168 TTAGCTATACTTGGCATTTAGAGCTCATTTAAGAAGCGGTTAAGTAGTTCATGATAAATT 4109 Query 1199 GTCCTA-AAATAGTATACCGCTTCTATATGGAAGGCTGAGAGGTCTTAGAATTGAAAGGA 1257 | ||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 4108 GGTCTAGAAATATATTACCGCTTCTCTATGGAAGGCTGAGAGGGCTTAGAATTGAAAGGA 4049 Query 1258 GAGATATAATGATTCATATATTTTTAACTGATAGTTATGATAATAAAGTTTTAAATACTG 1317 ||||||||||||||||||||||| ||| || |||| |||| || |||| | | Sbjct 4048 GAGATATAATGATTCATATATTTGTAAAAGAGGATTATAATAAAGAAACATTAAGGAGTT 3989 Query 1318 TACTCAGATATATTAATACTACTAGTGATAGAGA 1351 |||| || |||||||||||| |||| ||| Sbjct 3988 TACTTGAGTACATTAATACTACTGTAGATAAAGA 3955 Score = 167 bits (184), Expect = 2e-36 Identities = 215/287 (75%), Gaps = 15/287 (5%) Strand=Plus/Minus Query 504 TTTAATGTACTTAAAATAGTAAGTAGCTAC-TTATCATTTAGGGTTCTATAATTGAGAAT 562 |||||||||| |||||||||||||||| | |||||||||||| | ||||||||||||| Sbjct 4769 TTTAATGTACCTAAAATAGTAAGTAGCCCCCTTATCATTTAGGTCTGTATAATTGAGAAT 4710 Query 563 ATTGAGAGATAATCCGCTTCAATTGTAATTAATTGTTGACAACTATGAAGCGGGTATGCT 622 ||| ||||| |||||||||||| ||||||||||||||||||||||||| ||| || | Sbjct 4709 ATTAGAAGATA-TCCGCTTCAATTACAATTAATTGTTGACAACTATGAAGC-GGTCTGTT 4652 Query 623 ATAATTAGGTATAGTCAAATTTAGGAGATGAAATAGATGATTGATATATACTTA-GGAGA 681 ||| ||| ||||| | |||||||||| | ||||||||||| || ||| || Sbjct 4651 ATACTTA-GTATA-------TAAGGAGATGAATAATATGATTGATATTTATTTACACAGT 4600 Query 682 AGGTTATAATAAAGAATACTT-GTCTAAAGCACTCAGATTAATCAATGACCATGCTCCTA 740 | | |||| |||||| | || | | | || | | ||| | || | |||||| Sbjct 4599 A-GATATAGTAAAGATAAGTTAAAATTTATC-CTTAAAGCAATAAGGGATTTTTCTCCTA 4542 Query 741 GGGAGTTAAGTTATGATTTTAATAATGTAGAAGCGGATGTTAATATT 787 | || |||| || ||||||| ||| | ||||||||||| |||| Sbjct 4541 GAGAATTAACCTACGATTTTAGAAATCCAAAAGCGGATGTTCGTATT 4495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454409676051840