Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20haematobium_20[refseq_20GCF_5F000699445.1_202014-06- 09] 29,834 sequences; 375,894,156 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1115 84.2 3e-11 >seq1115 Length=78361 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 63757 GGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACA 63815 ||||||||||| ||| | ||| | || |||||||| ||||| || |||||| || Sbjct 33459 GGTGATAAATTCGCTAGTCG-ACACGGACAGAAAGGTACTTGTGGAATTCGTTATCGTCA 33517 Query 63816 AGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGC 63875 |||||||||||| || || || || || ||| ||| | | || ||||||||||| Sbjct 33518 AGAAGATATGCCATTCACATGTGAAGGAATTACACCAGATATTATTATTAATCCACACGC 33577 Query 63876 TTTTCCCAGTCGTATGAC 63893 | |||| ||||||||||| Sbjct 33578 TATTCCTAGTCGTATGAC 33595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666826430981040