Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq8745 86.0 4e-12 >seq8745 Length=35083 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 12446 GTTCCATTTCACCTACTTTAATACCACCATATCTACTTCTACCTGCCACAGGTTGATGAG 12505 ||||||||||||| | | |||||||| | ||| | |||| ||| ||| ||| || Sbjct 19328 GTTCCATTTCACCAAAACGTAAACCACCATCACGACTACGACCTTCCATAGGCTGACGAT 19387 Query 12506 TTAAATTATCAATCGGACCAGATATTCTAGAATGTATCTTATTTACAACTAAATGTCGTA 12565 |||| | | || |||||| | || | |||||| |||| |||| | ||| || Sbjct 19388 TTAATATTTGAACAGGACCACGTGATCGACTATGTATTTTATCATCAACCATATGCTTTA 19447 Query 12566 ACCGTTGATAATCACAAGGTGCAATAAAGATTTTTGAAGGAAAtttttttCCTGTAAAAC 12625 | |||||||||| ||| | | |||||||| |||| |||||| |||| ||||| | Sbjct 19448 AACGTTGATAATATGTTGGTCCTAAAAAGATTTGTGAATTCAATTTTCTTCCAGTAAATC 19507 Query 12626 CACAATACAT 12635 || |||||| Sbjct 19508 CATTATACAT 19517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328264559256592