Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_003266.2 Length=35994 Score E Sequences producing significant alignments: (Bits) Value seq15970 1669 0.0 seq10679 1287 0.0 seq16058 931 0.0 >seq15970 Length=4606 Score = 1669 bits (1850), Expect = 0.0 Identities = 1317/1575 (84%), Gaps = 15/1575 (1%) Strand=Plus/Minus Query 10918 TATGACCTGGCTTTGGAAGAGGGCGAGGGGCTGGCGCGCCTGGGGGCGTCGTCGCCGGAG 10977 ||||| |||| ||||||||||||||||| |||||||||||||| || | ||||| ||| Sbjct 2883 TATGATCTGGAATTGGAAGAGGGCGAGGGACTGGCGCGCCTGGGCGCACCATCGCCCGAG 2824 Query 10978 CGGCACCCGCGCGTGCAGATGAAAAGGGACGCTCGCGAGGCCTACGTGCCCAAGCAGAAC 11037 ||||||||||| ||||| |||||| |||| |||||||||| ||||||||| |||||||| Sbjct 2823 CGGCACCCGCGGGTGCAACTGAAAAAGGACTCTCGCGAGGCGTACGTGCCCCAGCAGAAC 2764 Query 11038 CTGTTCAGAGACAGGAGCGGCGAGGAGCCCGAGGAGATGCGCGCAGCCCGTTTCCACGCG 11097 |||||||| ||||||||||| |||||||| ||||||||||| ||| | || || ||||| Sbjct 2763 CTGTTCAGGGACAGGAGCGGTGAGGAGCCAGAGGAGATGCGAGCATCTCGATTTAACGCG 2704 Query 11098 GGGCGGGAGCTGCGGCGCGGCCTGGACAGAAAGAGGGTGCTGAGGGACGAGGATTTCGAG 11157 || || |||||||| | ||| ||||| ||| |||||||| ||||||||||| ||| Sbjct 2703 GGTCGCGAGCTGCGCCACGGTCTGGATCGAAGACGGGTGCTGCAAGACGAGGATTTTGAG 2644 Query 11158 GCGGACGAGCTGACGGGGATCAGCCCTGCGCGCGCGCACGTGGCCGCGGCCAACCTGGTC 11217 | || || |||| ||||||||||| || | || || ||||||||||||||||| ||| Sbjct 2643 GTCGATGAAGTGACAGGGATCAGCCCAGCTAGGGCACATGTGGCCGCGGCCAACCTAGTC 2584 Query 11218 ACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAACCAC 11277 | || |||||||||||||||||||||||| |||||||||||||||| || |||| ||| Sbjct 2583 TCAGCCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTCCAAAAATCTTTTAACACCCAT 2524 Query 11278 GTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGACCTG 11337 ||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||| Sbjct 2523 GTGCGCACCCTGATCGCCCGCGAGGAAGTGACCCTGGGTCTGATGCATCTGTGGGACCTG 2464 Query 11338 CTGGAGGCCATTGTGCAGAACCCCACCAGCAAACCGCTGACGGCGCAGCTGTTCCTGGTG 11397 ||||||| || ||||||||||| |||||||| ||||| || |||||||| |||||| Sbjct 2463 ATGGAGGCTATCACCCAGAACCCCACTAGCAAACCACTGACAGCTCAGCTGTTTCTGGTG 2404 Query 11398 GTGCAGCACAGTCGGGACAACGAGACTTTTAGGGAGGCGCTGCTGAATATCACCGAGCCC 11457 || || || || ||||||||||| | || ||||||||| || |||| ||||||||||| Sbjct 2403 GTTCAACATAGCAGGGACAACGAGGCATTCAGGGAGGCGTTGTTGAACATCACCGAGCCT 2344 Query 11458 GAGGGCCGCTGGCTTCTGGACCTGGTGAATATTCTGCAGAGCATCGTGGTGCAGGAGCGC 11517 || || | ||||| || ||| | || || ||||| || || | |||||||| || Sbjct 2343 GATGGGAGATGGCTGTATGATCTGATCAACATCCTGCAAAGTATTATAGTGCAGGAACGT 2284 Query 11518 GGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTTTCGGTGCTGAGTTTGGGCAAG 11577 | ||| || | ||||| |||| || ||||||| ||||| |||| ||||||| Sbjct 2283 AGCCTGGGTTTGGCTGAGAAAGTGGCAGCTATCAACTACTCGGTCTTGAGCCTGGGCAAA 2224 Query 11578 TACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAAGATC 11637 ||||||||| | ||||||||||||||||| ||||| |||||||| |||||||| ||||| Sbjct 2223 TACTACGCTCGCAAGATCTACAAGACCCCCTACGTACCCATAGATAAGGAGGTAAAGATA 2164 Query 11638 GACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGGGGGTG 11697 || |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct 2163 GATGGGTTTTACATGCGCATGACTCTGAAGGTGCTGACTCTGAGCGACGATCTGGGGGTG 2104 Query 11698 TACCGCAACGACAGGATGCGCCGCGCGGTAAGCGCCAGCAGGCGGCGCGAGCTGAGCGAT 11757 || ||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||| Sbjct 2103 TATCGCAATGACAGGATGCACCGCGCGGTGAGCGCCAGCAGGAGGCGCGAGCTGAGCGA- 2045 Query 11758 CAG-GAGCTGATGCACAGCCTGCAGCGGGCCCTGACCGGGGCCGGGACCGAGGGGGAGAG 11816 ||| || || ||||||||| |||| | || || || ||||||||||| || ||||||| Sbjct 2044 CAGAGAACTTATGCACAGCTTGCAAAGAGCTCTAACGGGGGCCGGGACTGATGGGGAGAA 1985 Query 11817 CTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGGTCTTGGAAGCCGC 11876 ||||||||||||||| |||||| |||| ||||| ||||| ||| ||| | |||| || || Sbjct 1984 CTACTTTGACATGGGAGCGGACTTGCAATGGCAACCCAGTCGCAGGGCCATGGAGGCTGC 1925 Query 11877 ------GGCGGTCCCTTACGTAGAAGAGGTGGA------CGATGAGGATGAGGGCGAGTA 11924 | | | |||||| ||||||||||||| ||| || || ||||||||||| Sbjct 1924 AGGGTGTGAGCTTCCTTACATAGAAGAGGTGGATGAAGTCGAGGACGAGGAGGGCGAGTA 1865 Query 11925 CCTGGAAGACTGATGGCGCGA-CCGTATTTTTGCTAGATGCAGCAACAGCCACCTCCTGA 11983 | ||||||||||||||||||| |||||||||||||||||| | || |||| | || || Sbjct 1864 CTTGGAAGACTGATGGCGCGACCCGTATTTTTGCTAGATGGAACAGCAGCAGGCACCGGA 1805 Query 11984 TCCCGCAATGCGGGCGGCGCTGCAGAGCCAGCCGTCCGGCATTAACTCCTCGGACGATTG 12043 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1804 CCCCGCAATGCGGGCGGCGCTGCAGAGCCAGCCGTCCGGCATTAACTCTTCGGACGATTG 1745 Query 12044 GACCCAGGCCATGCAACGCATCATGGCGCTGACGACCCGCAACCCCGAAGCCTTTAGACA 12103 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1744 GACCCAGGCCATGCAACGCATAATGGCGCTGACGACCCGCAACCCCGAAGCCTTTAGACA 1685 Query 12104 GCAGCCCCAGGCCAACCGGCTCTCGGCCATCCTGGAGGCCGTGGTGCCCTCGCGCTCCAA 12163 ||| |||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| Sbjct 1684 GCAACCCCAGGCCAACCGCCTTTCGGCCATACTGGAGGCCGTAGTGCCCTCCCGCTCCAA 1625 Query 12164 CCCCACGCACGAGAAGGTGCTGGCCATCGTGAACGCGCTGGTTGAGAACAAGGCCATTCG 12223 |||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||| || Sbjct 1624 CCCCACCCACGAGAAGGTCCTGGCTATCGTGAACGCGCTGGTGGAGAACAAGGCCATCCG 1565 Query 12224 CGGCGACGAGGCCGGGCTGGTGTACAACGCACTGCTGGAGCGCGTGGCCCGCTACAACAG 12283 ||| |||||||||||||| ||||| || || |||||||||||||||| |||||||| Sbjct 1564 TCCCGATGAGGCCGGGCTGGTATACAATGCTCTCTTGGAGCGCGTGGCCCGTTACAACAG 1505 Query 12284 CACCAACGTGCAGACCAACCTGGACCGCATGGTGACCGACGTGCGCGAAGCCGTGGCCCA 12343 || ||||||||| |||||||||||| | ||||||||||| |||||||| |||||| | || Sbjct 1504 CAGCAACGTGCAAACCAACCTGGACAGGATGGTGACCGATGTGCGCGAGGCCGTGTCTCA 1445 Query 12344 GCGCGAACGGTTCCACCGCGAGTCCAACCTGGGATCCATGGTGGCACTGAACGCCTTCCT 12403 ||||| |||||||| |||| ||||| |||| || |||| || || ||||| ||||| Sbjct 1444 ACGCGAGCGGTTCCAGCGCGGCGCCAACTTGGGGTCGTTGGTAGCGCTAAACGCTTTCCT 1385 Query 12404 CAGCACGCAGCCCGCCAACGTGCCCCGGGGCCAGGAGGACTACACCAACTTCATTAGCGC 12463 |||||| |||||||||||||||||||| || ||| | ||||| || ||||| | || || Sbjct 1384 CAGCACCCAGCCCGCCAACGTGCCCCGTGGTCAGCAAGACTATACAAACTTTTTGAGTGC 1325 Query 12464 CCTGCGGCTAATGGT 12478 || | || ||||| Sbjct 1324 ATTGAGACTCATGGT 1310 Score = 1225 bits (1358), Expect = 0.0 Identities = 998/1213 (82%), Gaps = 54/1213 (4%) Strand=Plus/Minus Query 9611 TTGAAATAGGCGGTTCTGAGACGGCGGATGGTGGCGAGGAGCACCAGGTCTTTGGGCCCG 9670 || |||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 4447 TTAAAATAGGCAGTTTTGAGACGGCGGATGGTGGCGAGGAGCACCAGGTCTTTGGGTCCG 4388 Query 9671 GCTTGCTGGATGCGCAGACGGTCGGCCATGCCCCAGGCGTGGTCCTGACACCTGGCCAGG 9730 ||||| ||||||||||| || | |||||| ||||| || | |||||||| |||||||| Sbjct 4387 GCTTGTTGGATGCGCAGGCGATGGGCCATTCCCCAAGCATTATCCTGACATCTGGCCAGA 4328 Query 9731 TCCTTGTAGTAGTCCTGCATGAGCCGCTCCACGGGCACCTCCTCCTCGCCCGCGCGGCCG 9790 || || |||||||| |||||||| || ||||||||||| || || |||||||| | ||| Sbjct 4327 TCTTTATAGTAGTCTTGCATGAGTCGTTCCACGGGCACTTCTTCTTCGCCCGCTCTGCCA 4268 Query 9791 TGCATACGCGTGAGCCCAAACCCGCGCTGCGGCTGGACGAGCGCCAGGTCAGCGACGACG 9850 ||||| || |||| ||| ||||||||| |||||||| || |||||||| || || || Sbjct 4267 TGCATGCGAGTGATCCCGAACCCGCGCATGGGCTGGACAAGTGCCAGGTCCGCTACAACC 4208 Query 9851 CGCTCGGCGAGGATGGCCTGCTGGATCTGGGTGAGGGTGGTCTGGAAGTCGTCAAAGTCG 9910 | |||||||||||||| ||||| | |||||||||||||| ||||||||||||||||| Sbjct 4207 CTTTCGGCGAGGATGGCTTGCTGCACCTGGGTGAGGGTGGCTTGGAAGTCGTCAAAGTCC 4148 Query 9911 ACGAAGCGGTGGTAGGCTCCGGTGTTAATGGTGTAGGAGCAGTTGGCCATGACGGACCAG 9970 || |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||| Sbjct 4147 ACAAAGCGGTGGTAGGCCCCGGTGTTGATTGTGTAGGAGCAGTTGGCCATGACTGACCAG 4088 Query 9971 TTGACAGTCTGGTGACCGGGCCGCGCGAGCTCGTGGTACTTGAGGCGCGAGTAGGCGCGC 10030 ||||| |||||||| || || ||| |||||||| |||||||||||||||||| ||||| Sbjct 4087 TTGACTGTCTGGTGCCCAGGGCGCACGAGCTCGGTGTACTTGAGGCGCGAGTATGCGCGG 4028 Query 10031 GAGTCGAAGATGTAGTCGTTGCAGGTGCGCACCAGGTACTGGTAGCCGATGAGGAAGTGC 10090 | ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 4027 GTGTCAAAGATGTAATCGTTGCAGGTGCGCACCAGGTACTGGTAGCCGATGAGAAAGTGT 3968 Query 10091 GGCGGCGGCTGGCGGTAGAGCGGCCATCGCTCGGTGGCGGGGGCGCCGGGCGCTAGGTCC 10150 ||||| ||||||||||| || ||||||||||| || || ||||| ||||| || ||||| Sbjct 3967 GGCGGTGGCTGGCGGTACAGGGGCCATCGCTCTGTAGCCGGGGCTCCGGGGGCAAGGTCT 3908 Query 10151 TCGAGCATGGTGCGGTGGTAGCCGTAGATGTACCTTGACATCCAGGTGATGCCNNNNNNN 10210 || |||||| ||||||||| |||||||||||||| |||||||||||||| || Sbjct 3907 TCCAGCATGAGGCGGTGGTAACCGTAGATGTACCTGGACATCCAGGTGATACCGGAGGCG 3848 Query 10211 NNNNNNNNNNCGCGAGGGAACTCGCGGACGCGGTTCCAGATGTTGCGCAGCGGCAGGAAG 10270 | || ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 3847 GTGGTGGATGCCCGCGGGAACTCGCGTACGCGGTTCCAGATGTTGCGCAGCGGCATGAAG 3788 Query 10271 TAGTTCATGGTGGGCACGGTCTGGCCCGTGAGGCGCGCGCAGTCGTTGATGCTCTAGACA 10330 ||||||||||| |||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct 3787 TAGTTCATGGTAGGCACGGTTTGGCCCGTGAGACGTGCACAGTCGTTGATGCTCTAGACA 3728 Query 10331 TACGGGCAAAAACGAAAGCGGTCAGCGGCTCGACTCCGTGGCCTGGAGGCTAAGCGAACG 10390 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3727 TACGGGCAAAAACGAAAGCGGTCAGCGGCTCGTCTCCGTGGCCTGGAGGCTAAGCGAACG 3668 Query 10391 GGTTGGGCTGCGCGTGTACCCCGGTTCGAATCTCGAATCAGGCTGGAGCCGCAGCTAACG 10450 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3667 GGTTGGGCTGCGCGTGTACCCCGGTTCGAATCTCGGATCAGGCTGGAGCCGCAGCTAACG 3608 Query 10451 TGGTACTGGCACTCCCGTCTCGACCCAGGCCTGCACAAAACCTCCAGGATACGGAGGC-G 10509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3607 TGGTACTGGCACTCCCGTCTCGACCCAGGCCTGCACAAAACCTCCAGGATACGGAGGCGG 3548 Query 10510 GGTCGTTTTGCAAATTTTTGGCGGTCGAAAAAAGCTAGTAAGC-GCGGAAAGCGGCCGAC 10568 ||||||||| |||| | | || ||| ||| || ||| |||| || Sbjct 3547 GGTCGTTTTTTTTGCTTTTTCC--TGGATGGGAGCCAGT--GCTGCGTCAAGCTTTAGAA 3492 Query 10569 C------------------GCAATGGCTCACTGCCGTAGATTGGAGAAGAATCGCCAGGG 10610 | | | |||||| | ||||| ||||||| |||||||||| Sbjct 3491 CACTCAGTTCTCGGGGCTGGGAGTGGCTCGCGCCCGTATTCTGGAGAATTATCGCCAGGG 3432 Query 10611 TTGCGTTGCGGTGTGCCCCGGTTCGAGACCGCTCGGGTCGGCCGAATTCCGCGGCTAACG 10670 |||||||||||||||||| | |||||| | || |||| || |||| Sbjct 3431 TTGCGTTGCGGTGTGCCCGGTTTCGAGTCTTAGCG----CGCCGGAT----CGGC----- 3385 Query 10671 AGGGCGTGGCTGCCCCGTCGTTTCCAAGACCCCATAAGCCAGCCGACTTCTCCAG-TTAC 10729 || | || || ||||| |||||||| |||||||||||||||||| |||| Sbjct 3384 ------CGGTTCCCGCGACGTTTNTAAGACCCC----GCCAGCCGACTTCTCCAGTTTAC 3335 Query 10730 -GGAGCGAGCCC-CTCttttgttttgttttttG----CCAGATGCATCCCGTACTGCGGC 10783 ||||||||||| || |||| |||||||||||| ||||||||||||||| ||||| | Sbjct 3334 GGGAGCGAGCCCTCTTTTTTTTTTTGTTTTTTGTTGCCCAGATGCATCCCGTGCTGCGAC 3275 Query 10784 AGATGCGCCCCCA 10796 ||||||||||||| Sbjct 3274 AGATGCGCCCCCA 3262 Score = 940 bits (1042), Expect = 0.0 Identities = 907/1163 (78%), Gaps = 42/1163 (4%) Strand=Plus/Minus Query 13592 TAAACGCCGCTGGCACGACAGGCAGCGGGGACTGATGTGGGACGATGAGGATTCCGCCGA 13651 || ||||| | |||||||| ||| ||| || |||||||||||||||| || ||||| Sbjct 1205 TAGACGCCAGCGCCACGACAGACAGATGGGTCTTGTGTGGGACGATGAGGACTCTGCCGA 1146 Query 13652 CGACAGCAGCGTGTTGGACTTGGGCGGGAGTGGTGGTGGTAACCCGTTCGCTCACCTGCG 13711 || | |||||||||||||||||| || || || || || |||||||||||||| |||| Sbjct 1145 TGATACCAGCGTGTTGGACTTGGGTGGAAGAGGAGGGGGCAACCCGTTCGCTCATNTGCG 1086 Query 13712 CCCCCGCGTCGGGCGCCTGATGTAAAAA-GAAACCAAAA-ATAAATGGTACTCACCAAGG 13769 ||| | |||||||| || ||||||| |||| |||| | ||||| |||||||||| Sbjct 1085 TCCCAGATTCGGGCGCATGTTGTAAAAGTGAAAGTAAAATAAAAATGCAACTCACCAAGC 1026 Query 13770 CCATGGCGACC-AGCGTGCGTTCGTTTCTTCTCTGTT----GTATCTAGTATGATGAGG- 13823 ||||||||||| |||||||||||||| ||| | |||| || ||||||| ||||||| Sbjct 1025 CCATGGCGACCGAGCGTGCGTTCGTT-CTTTTTTGTTATCTGTGTCTAGTACGATGAGGA 967 Query 13824 -------CGTGC----------------GTACCCGGAGGGTCCTCCTCCCTCGTACGAGA 13860 ||||| ||| ||||||||||||||||| || ||||||| Sbjct 966 GACGACCCGTGCTAGCCGGACCGGTGGTGTATCCGGAGGGTCCTCCTCCTTCTTACGAGA 907 Query 13861 GCGTGATGCAGCAGGCAATGGCNNNNNNNNNNNNNNTGCAGCCCCCGCTGGAGGCTCCTT 13920 ||||||||||||| || ||| | |||||||| ||||||| ||| | Sbjct 906 GCGTGATGCAGCAC-CA--GGCGGCGATGA------TACAGCCCCCACTGGAGGTTCCCT 856 Query 13921 ACGTGCCACCGCGGTACCTGGCGCCTACGGAGGGGCGAAACAGCATTCGTTACTCGGAGC 13980 ||| || ||||||||||||||||||||||| ||| || ||||||||||||||||||||| Sbjct 855 TCGTACCCCCGCGGTACCTGGCGCCTACGGAAGGGAGACACAGCATTCGTTACTCGGAGC 796 Query 13981 TGGCACCCTTGTACGATACCACCCGGTTGTACCTGGTGGACAACAAGTCG-GCGGACATC 14039 || | ||| |||||||||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct 795 TGTCGCCCCTGTACGATACCACCAAGTTGTATCTGGTTGACAACAAGTCGCGCGGACATC 736 Query 14040 GCCTCGCTGAACTACCAGAACGACCACAGCAACTTTCTGACCACCGTGGTGCAGAACAAC 14099 ||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||| Sbjct 735 GCCTCCCTGAACTATCAGAACGACCACAGCAACTTCCTGACCACGGTGGTGCAGAACAAT 676 Query 14100 GATTTCACCCCCACGGAGGCCAGCACCCAGACCATCAACTTTGACGAGCGCTCGCGGTGG 14159 || || |||||||||||||| |||||||||||||||||||||||||| || ||||| ||| Sbjct 675 GACTTTACCCCCACGGAGGCTAGCACCCAGACCATCAACTTTGACGAACGGTCGCGATGG 616 Query 14160 GGCGGTCAGCTGAAAACCATCATGCATACCAACATGCCCAACGTGAACGAGTTCATGTAC 14219 |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||| | Sbjct 615 GGCGGTCATCTGAAGACCATCATGCACACCAACATGCCCAACGTGAACGAGTACATGTTC 556 Query 14220 AGCAACAAGTTCAAGGCGCGGGTCATGGTCTCCCGCAAGACCCCCAACGGGGTGACAGTA 14279 |||||||||||||||||| |||| ||||| ||| | || | | | || || |||||| Sbjct 555 AGCAACAAGTTCAAGGCGAGGGTGATGGTGTCCAGAAAAGCTGCTGAGGGTGTTACAGTA 496 Query 14280 GGGGATGATTATGATGGTAGTCAGGATGAGCTGAAATACGAGTGGGTGGAGTTTGAGCTG 14339 || |||||| || ||||| |||| || |||||||| ||||| | Sbjct 495 AATGACACCTATGATCATAAAGAGGATATCTTGAAGTATGAGTGGGTTGAGTTCATTTTA 436 Query 14340 CCCGAAGGCAACTTCTCGGTGACCATGACCATTGACCTGATGAACAACGCCATCATCGAC 14399 || ||||||||||| || | |||||||| || |||||||||||||| |||||||| ||| Sbjct 435 CCAGAAGGCAACTTTTCAGCCACCATGACGATCGACCTGATGAACAATGCCATCATTGAC 376 Query 14400 AATTACTTGGCAGTGGGGCGGCAGAACGGGGTGCTGGAGAGCGACATCGGCGTGAAGTTC 14459 || ||| ||| | | || | ||||| || |||||||| || ||||| || || ||||| Sbjct 375 AACTACCTGGAAATTGGCAGACAGAATGGAGTGCTGGAAAGTGACATTGGTGTTAAGTTT 316 Query 14460 GACACCCGGAACTTCAGGCTGGGTTGGGACCCCGTGACCGAGCTGGTCATGCCCGGGGTG 14519 ||||| | || |||||||| || |||||||||| || || || | ||||| || || Sbjct 315 GACACTAGAAATTTCAGGCTCGGGTGGGACCCCGAAACTAAGTTGATTATGCCAGGAGTC 256 Query 14520 TACACCAACGAGGCCTTCCACCCCGACATCGTGCTGTTGCCCGGCTGCGGGGTGGACTTT 14579 ||||| | ||||| ||||| || ||||| || || |||| || |||||||| |||||| Sbjct 255 TACACTTATGAGGCATTCCATCCTGACATTGTATTGCTGCCTGGTTGCGGGGTAGACTTT 196 Query 14580 ACCGAGAGCCGCCTCAGTAATATGCTGGGCATCCGCAAGAGGCAGCCCTTCCAGGAGGGT 14639 || || ||||| || || || |||| |||||| | ||||| || || |||||||||||| Sbjct 195 ACTGAAAGCCGACTTAGCAACTTGCTTGGCATCAGGAAGAGACATCCATTCCAGGAGGGT 136 Query 14640 TTCCAGATCATGTACGAGGACCTGGATGGAGGTAACATCCCCGCGCTCTTGGATGTCGAG 14699 ||| | |||||||| || || || || || ||| | || || || || |||||||| Sbjct 135 TTCAAAATCATGTATGAAGATCTTGAAGGGGGTGATATTCCTGCCCTTTTGGATGTGACT 76 Query 14700 GCCTATGAGAAAAGCAAGGAGGA 14722 | ||||||| ||||||| |||| Sbjct 75 GGCTATGAGGAAAGCAAAAAGGA 53 Score = 104 bits (114), Expect = 5e-18 Identities = 83/96 (86%), Gaps = 8/96 (8%) Strand=Plus/Minus Query 10709 CCAGCCGACTTCTCCAGTT-ACGG-AGCGAGCCCC--TCttttgttttgttttttG---- 10760 ||||||||||||||||||| |||| ||||||||| | |||| |||||||||||| Sbjct 3085 CCAGCCGACTTCTCCAGTTTACGGGAGCGAGCCCTCTTTTTTTTTTTTGTTTTTTGTTGC 3026 Query 10761 CCAGATGCATCCCGTACTGCGGCAGATGCGCCCCCA 10796 ||||||||||||||| ||||| |||||||||||||| Sbjct 3025 CCAGATGCATCCCGTGCTGCGACAGATGCGCCCCCA 2990 Score = 86.0 bits (94), Expect = 1e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 10918 TATGACCTGGCTTTGGAAGAGGGCGAGGGGCTGGCGCGCCTGGGGGCGTCGTCGCCGGAG 10977 ||||| |||| ||||||||||||||||| |||||||||||||| || | ||||| ||| Sbjct 3155 TATGATCTGGAATTGGAAGAGGGCGAGGGACTGGCGCGCCTGGGCGCACCATCGCCCGAG 3096 Query 10978 CGGCACCCGC 10987 |||||||||| Sbjct 3095 CGGCACCCGC 3086 >seq10679 Length=1604 Score = 1287 bits (1426), Expect = 0.0 Identities = 1069/1311 (82%), Gaps = 18/1311 (1%) Strand=Plus/Minus Query 24223 AAGGAGA---TGCAAGACCCCGAGAGCTCCGAGGAGGGCAAGCCCGTGGTCAGCGACGAG 24279 ||||||| |||| || || || ||| || ||||||||||| || ||||| |||||| Sbjct 1565 AAGGAGAACATGCAGGATCCAGACGCCTCGGACGAGGGCAAGCCGGTAGTCAGTGACGAG 1506 Query 24280 CAGCTGGCGCGGTGGCTGGGACCCCAAGCTAGTCCCCAGAGCTTGGAAGAGCGGCGCAAG 24339 ||||| | || |||||||| || | || ||| ||| ||||||||| |||||||| Sbjct 1505 CAGCTATCTCGCTGGCTGGGTACCAA--CTCCCCCCGAGAT-TTGGAAGAGAGGCGCAAG 1449 Query 24340 CTCATAATGGCCGTGGTCCTGGTGACCGCGGAGCTGGAGTGTCTGCGCCGCTTCTTCGCC 24399 || || ||||| || || || || || | ||||||||||||| |||||||||| ||| || Sbjct 1448 CTTATGATGGCTGTAGTGCTAGTAACTGTGGAGCTGGAGTGTTTGCGCCGCTTTTTCACC 1389 Query 24400 GACGCAGAAATTCTGCGCAAGGTCGAGGAGAACCTGCACTACATCTTCAGGCACGGGTTC 24459 ||| | || | ||||||||| | ||||||||||||||||||| ||| || || || ||| Sbjct 1388 GACCCCGAGACCCTGCGCAAGCTAGAGGAGAACCTGCACTACACCTTTAGACATGGCTTC 1329 Query 24460 GTACGCCAGGCCTGCAAGATCTCCAACGTGGAGCTGACCAACCTGGTCTCCTACATGGGC 24519 || || ||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 1328 GTGCGGCAGGCATGCAAGATCTCCAACGTGGAGCTTACCAACCTGGTTTCTTACATGGGC 1269 Query 24520 ATCTTGCACGAGAACCGCCTGGGGCAGAACGTGCTGCACACCACCCTGCGCGGGGAGGCC 24579 || ||||| |||||||| || ||||||| ||| |||||||||||||| ||||||||| Sbjct 1268 ATTTTGCATGAGAACCGGCTAGGGCAGAGCGTCCTGCACACCACCCTTAAAGGGGAGGCC 1209 Query 24580 CGCCGCGACTACATCCGCGACTGCGTTTACCTCTACCTCTGCCACACCTGGCAGACAGCC 24639 ||||| ||||||||||| ||||| || ||||||||||||||||| ||||||||||| | | Sbjct 1208 CGCCGTGACTACATCCGAGACTGTGTCTACCTCTACCTCTGCCATACCTGGCAGACTGGC 1149 Query 24640 ATGGGCGTGTGGCAGCAGTGTCTGGAGGAGCAGAACCTAAAAGAGCTCTGCAAGCTCCTG 24699 ||||| |||||||| |||||| |||| |||||||||||||||||||| ||||||| || Sbjct 1148 ATGGGTGTGTGGCAACAGTGTTTGGAAGAGCAGAACCTAAAAGAGCTGGACAAGCTCTTG 1089 Query 24700 CAGAAGAACCTCAAGGCCCTGTGGACCGGGTTCGACGAGCGCACCACCGCCTCGGACCTG 24759 |||| |||||| ||||||||||| || || || ||||||||| ||||||||||||| Sbjct 1088 CAGAGATCCCTCAAAGCCCTGTGGACAGGTTTTGATGAGCGCACCGTCGCCTCGGACCTG 1029 Query 24760 GCAGACCTCATTTTCCCCGAGCGTCTCAGGCTGACGCTGCGCAACGGTTTGCCCGACTTT 24819 |||||| |||| |||||||||||||||||| | || ||||| ||||| |||| |||||| Sbjct 1028 GCAGACATCATCTTCCCCGAGCGTCTCAGGGTTACTCTGCGAAACGGCCTGCCAGACTTT 969 Query 24820 ATGAGTCAAAGCATGTTGCAAAACTTTCGCTCTTTCATCCTCGAACGCTCCGGGATCCTG 24879 ||||| || |||||| | | |||||||||||||||||||| ||||||||||| |||||| Sbjct 968 ATGAGCCAGAGCATGCTTAACAACTTTCGCTCTTTCATCCTGGAACGCTCCGGTATCCTG 909 Query 24880 CCGGCCACCTGCTCCGCGCTGCCCTCGGACTTCGTGCCGCTGACCTTCCGCGAGTGCCCC 24939 || |||||||||| ||||||||||| ||||| ||||| || |||| |||||||||||| Sbjct 908 CCTGCCACCTGCTGTGCGCTGCCCTCCGACTTTGTGCCTCTCACCTACCGCGAGTGCCCA 849 Query 24940 CCGCCGCTGTGGAGCCACTGCTACCTGCTGCGCTTGGCCAACTACCTGGCCTACCACTCG 24999 |||||||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||| Sbjct 848 CCGCCGCTATGGAGCCACTGCTACCTGTTCCGCCTGGCCAACTACCTCTCCTACCACTCG 789 Query 25000 GACGTGATCGAGGACGTCAGCAGCGAGGGCCTGCTCGAGTGCCACTGCCGCTGCAACCTC 25059 || || || ||||| || ||| | || || ||||| || ||||||||||||||||| || Sbjct 788 GATGTTATAGAGGATGTGAGCGGAGACGGTCTGCTGGAATGCCACTGCCGCTGCAATCTT 729 Query 25060 TGCACGCCGCACCGCTCCCTGGCCTGCAACCCCCAGCTGCTGAGCGAGACCCAGATCATC 25119 ||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 728 TGCACACCCCACCGCTCCCTTGCCTGCAACCCCCAGTTGCTGAGCGAGACCCAGATCATC 669 Query 25120 GGCACCTTCGAGTTGCAAGGGCCCGGC------GATGAGGGTTCTGCCGCCAAGGGGGGT 25173 ||||||||||||||||| || ||| || | ||||| ||| | | | | || Sbjct 668 GGCACCTTCGAGTTGCAGGGTCCCAGCAGTGAAGGCGAGGGGTCTTCTCCGGGGCAGAGT 609 Query 25174 CTGAAACTCACCCCGGGGCTGTGGACCTCGGCCTACTTGCGCAAGTTCGTGCCCGAGGAC 25233 |||||||| || ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct 608 CTGAAACTGACACCGGGGCTGTGGACCTCCGCCTACCTGCGCAAGTTTCATCCCGAGGAT 549 Query 25234 TACCATCCCTTCGAGATCAGGTTCTACGAGGACCAATCCCAGCCGCCCAAGGCCGAGCTG 25293 ||||| |||| |||||||||||||| |||||||| || || || ||||| | |||||| Sbjct 548 TACCACCCCTATGAGATCAGGTTCTATGAGGACCAGTCACATCCTCCCAAAGTCGAGCTC 489 Query 25294 TCGGCCTGCGTCATCACCCAGGGGGCGATCCTGGCCCAATTGCAAGCTATCCAGAAATCC 25353 || |||||||||||||||||||| || || ||||||||||||||||| ||||| |||||| Sbjct 488 TCAGCCTGCGTCATCACCCAGGGAGCAATTCTGGCCCAATTGCAAGCCATCCAAAAATCC 429 Query 25354 CGCCAAGAATTCTTGCTGAAAAAGGGCCGCGGGGTCTACCTTGATCCCCAGACCGGTGAG 25413 ||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 428 CGCCAAGAATTTCTACTGAAAAAGGGAAGCGGGGTCTACCTTGACCCCCAGACCGGTGAG 369 Query 25414 GAGCTTAACCC---CGNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAAGAAGCTGAAAGT 25470 ||||| ||| | |||||||||||||| || Sbjct 368 GAGCTCAACACAAGGTTCCCCCAGGATGTCCCATCGCCGAGGAAGCAAGAAGCTGAAGGT 309 Query 25471 GGAGCTGCCGCCCGTGGAGGATTTGGAGGAAGACTGGGAGAGCAGTCAGGC 25521 | ||||| ||||| |||||| |||||||||||||||| ||||||||| Sbjct 308 GCAGCTGACGCCCCCAGAGGATATGGAGGAAGACTGGGA---CAGTCAGGC 261 Score = 122 bits (134), Expect = 2e-23 Identities = 86/96 (90%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 25661 AGCAGCACGGATACCATCTCCGCTCCGGGTCGGGG--TCCCGCT-CGACCCCACAGTAGA 25717 |||||||||| |||||||||||||||||||||||| ||| || || ||| |||||||| Sbjct 103 AGCAGCACGGCTACCATCTCCGCTCCGGGTCGGGGGGTCCAGCGGCGGCCCAACAGTAGA 44 Query 25718 TGGGACGAGACCGGGCGATTCCCGAACCCCACCACC 25753 ||||||||||||||||||||||| ||||| |||||| Sbjct 43 TGGGACGAGACCGGGCGATTCCCAAACCCGACCACC 8 >seq16058 Length=1913 Score = 931 bits (1032), Expect = 0.0 Identities = 809/1013 (80%), Gaps = 0/1013 (0%) Strand=Plus/Plus Query 19703 GAGTACATGAACGGCCGGGTGGTGGCGCCCTCGCTGGTGGACGCCTACATTAACATTGGG 19762 |||||||||||||| || ||||| | || || ||||| || | ||||| |||||||| Sbjct 24 GAGTACATGAACGGGCGAGTGGTTTCCCCATCTCTGGTCGATTCATACATCAACATTGGC 83 Query 19763 GCGCGCTGGTCGCTGGACCCCATGGACAACGTAAATCCCTTCAACCACCACCGCAATGCG 19822 || | ||||| || ||||| |||||||| || ||||| || ||||||||||| ||||| Sbjct 84 GCCAGGTGGTCTCTTGACCCAATGGACAATGTGAATCCATTTAACCACCACCGGAATGCT 143 Query 19823 GGCTTGCGCTACCGCTCCATGCTCCTGGGCAACGGGCGCTACGTGCCATTCCACATCCAG 19882 ||| | |||||||| |||||||| |||||||| || || || ||||| |||||||| || Sbjct 144 GGCCTACGCTACCGGTCCATGCTTCTGGGCAATGGCCGTTATGTGCCTTTCCACATACAA 203 Query 19883 GTGCCCCAGAAATTTTTTGCCATTAAGAGCCTCCTGCTCCTGCCCGGGTCCTACACCTAC 19942 ||||| || ||||| ||||| | |||| ||| || || || || || ||||||||||| Sbjct 204 GTGCCTCAAAAATTCTTTGCTGTCAAGAACCTACTTCTTCTACCTGGCTCCTACACCTAT 263 Query 19943 GAGTGGAACTTCCGCAAGGACGTCAACATGATCCTGCAGAGTTCCCTTGGCAACGACCTG 20002 |||||||||||| | |||| || |||||| ||||||| ||||||||||| || ||||| Sbjct 264 GAGTGGAACTTCAGAAAGGGTGTGAACATGGTCCTGCAAAGTTCCCTTGGAAATGACCTC 323 Query 20003 CGCACAGACGGGGCCTCCATCACCTTCACCAGCATTAACCTCTACGCCACCTTCTTCCCC 20062 | ||||| || || ||| | ||||||||||| |||||||| ||||||||||||||| Sbjct 324 AGAACAGATGGTGCTAACATAAGTTTCACCAGCATCAACCTCTATGCCACCTTCTTCCCC 383 Query 20063 ATGGCGCACAACACCGCCTCCACGCTTGAGGCCATGCTGCGCAACGACACCAATGACCAA 20122 ||||| ||||||||||| || || ||||| ||||||||||||||||| |||||||| || Sbjct 384 ATGGCTCACAACACCGCTTCAACTCTTGAAGCCATGCTGCGCAACGATACCAATGATCAG 443 Query 20123 TCCTTCAACGACTACCTCTCGGCGGCCAACATGCTCTATCCCATCCCGGCCAACGCCACC 20182 || ||||||||||||||||| || || |||||||| || |||||||| ||||| || ||| Sbjct 444 TCATTCAACGACTACCTCTCTGCAGCTAACATGCTTTACCCCATCCCTGCCAATGCAACC 503 Query 20183 AACGTGCCCATCTCCATCCCCTCGCGCAACTGGGCCGCCTTTCGCGGCTGGTCCTTCACG 20242 ||| | || || |||||||| || ||||||||||| ||||| | |||||||||||||| Sbjct 504 AACATTCCAATTTCCATCCCATCTCGCAACTGGGCAGCCTTCAGGGGCTGGTCCTTCACC 563 Query 20243 CGTCTCAAGACCAAAGAGACGCCCTCGCTGGGCTCCGGGTTCGACCCCTACTTCGTCTAC 20302 | ||||| ||||| ||||| || || || || || |||||||| ||||||||||| || Sbjct 564 AGACTCAAAACCAAGGAGACTCCATCTCTTGGATCAGGGTTCGATCCCTACTTCGTTTAT 623 Query 20303 TCGGGCTCCATCCCCTACCTCGACGGNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAGGTC 20362 || || || || |||||||| || || ||||||| | Sbjct 624 TCTGGATCTATTCCCTACCTGGATGGCACTTTTTACCTTAACCACACTTTCAAGAAGGGC 683 Query 20363 TCCATCACCTTCGACTCTTCCGTCAGCTGGCCCGGCAACGACCGGCTCCTGACGCCCAAC 20422 ||||||| || ||||| || ||||||||||| ||||| ||| |||| || | || || Sbjct 684 TCCATCATGTTTGACTCCTCAGTCAGCTGGCCTGGCAATGACAGGCTGTTGTCTCCAAAT 743 Query 20423 GAGTTCGAAATCAAGCGCACCGTCGACGGCGAGGGATACAACGTGGCCCAGTGCAACATG 20482 ||||| |||||||||||||| || || || || |||||||| |||||||| ||||||||| Sbjct 744 GAGTTTGAAATCAAGCGCACTGTGGATGGGGAAGGATACAATGTGGCCCAATGCAACATG 803 Query 20483 ACCAAGGACTGGTTCCTGGTCCAGATGCTGGCCCACTACAACATCGGCTACCAGGGCTTC 20542 ||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||||| Sbjct 804 ACCAAAGACTGGTTCCTGGTTCAGATGCTTGCCAACTACAACATTGGCTACCAGGGCTTT 863 Query 20543 TACGTGCCCGAGGGCTACAAGGACCGCATGTACTCCTTCTTCCGCAACTTCCAGCCCATG 20602 ||| | || ||||| |||||||| |||||||||||||| ||| | ||||||||||| ||| Sbjct 864 TACATCCCTGAGGGATACAAGGATCGCATGTACTCCTTTTTCAGAAACTTCCAGCCTATG 923 Query 20603 AGCCGCCAGGTGGTGGACGAGGTTAACTACAAGGACTACCAGGCCGTCACCCTGGCCTAC 20662 ||| | |||||||| || |||||||| |||| |||||| | ||||||||| | | || Sbjct 924 AGCAGGCAGGTGGTTGATGAGGTTAATTACACTGACTACAAAGCCGTCACCTTACCATAT 983 Query 20663 CAACACAACAACTCGGGCTTCGTTGGATACCTCGCGCCCACTATGCGCCAGGG 20715 |||||||||||||| ||||| || ||||||| ||||| |||||| | ||||| Sbjct 984 CAACACAACAACTCTGGCTTTGTANGATACCTTGCGCCTACTATGAGACAGGG 1036 Score = 93.3 bits (102), Expect = 1e-14 Identities = 220/324 (68%), Gaps = 35/324 (11%) Strand=Plus/Plus Query 21581 CCCTG-CGCCGCAACCAGGAGGCACTCTA---CCGCTTCCTCAACT--CCCACTCTGCAT 21634 ||||| | ||| ||||||| || | || ||| ||||| ||| |||| || | | Sbjct 1549 CCCTGGCCCCGGAACCAGGGGGGGCGTTAATTCCGTTTCCTAAACCACCCCATTCATCTT 1608 Query 21635 ACTTT-CGCTCTCACCGCGCGCGCATTGAGAAGGCCACCGCCTTCGACCGCATGAATC-- 21691 ||||| || ||||||||||| ||||| || | ||||||||| || | ||| ||| || Sbjct 1609 ACTTTTCGTTCTCACCGCGCACGCATCGAAAGGGCCACCGCGTTTGCCCGTATGGATATG 1668 Query 21692 ----AAGACATGTAACAGTGTGTTTTA----AAA------TATGTTTA-ATAAACA---G 21733 ||| ||||||| ||||| | ||| ||| |||| || || | Sbjct 1669 CAATAAGTCATGTAAACCCGTGTTCAATCCCAAAGCACTTTATTTTTACATGCACTAAGG 1728 Query 21734 CACTTTTTATGTGACACATGCATTTGAGATAATTTTATTCTTAAAAATCGAAGGGGTTCT 21793 | || || | | || ||| | ||| | ||| | || | ||||| || ||||||| Sbjct 1729 CTCTCGTTTTTT-ACTCATTCGTTT----TCATTATTCACTCAGAAATCAAATGGGTTCT 1783 Query 21794 GCCGGGAGGTTTCGGCATGGCCCGCGGGCAGGGACACGTTGCGGAACTGGTACTTGGCCA 21853 | |||||| || || |||||||||||||| |||||||| |||| || || | Sbjct 1784 GGCGGGAG---TCAAAGTGACCCGCGGGCAGGGATACGTTGCGCCACTGTAACCTGTTCT 1840 Query 21854 GCCACTTGAACTCGGGGATCAGCA 21877 ||||||||||||||||||||| || Sbjct 1841 GCCACTTGAACTCGGGGATCACCA 1864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115024976216256