Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq5310 100 2e-16 >seq5310 Length=161011 Score = 100 bits (110), Expect = 2e-16 Identities = 121/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCA--TTTGCGGCCATATTCTGGC 22807 |||||||| || || ||||| || | |||||| | || || ||||| ||||| |||| Sbjct 63119 GCCTTTGCAGCAGTAGAAGGAGT--TTTTTTCTCCGGCAGCTTCGCGGCTATATTTTGGC 63062 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| || || ||||| || ||| | ||| || ||||| || || | |||| Sbjct 63061 TGAAGAAGCGAGGACTTATGCCTGGATTGTCCTTTAGTAATGAGTTAATCAGTAGAGACG 63002 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAAT 22910 |||| |||| |||||||| |||||| | ||||||| ||| || Sbjct 63001 AAGGATTACATTGTGACTTCGCTTGTCTTCTGTTTAAGCACAT 62959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356124851678344