Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17667 87.8 9e-13 >seq17667 Length=3165 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 1526 GGATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 1580 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 3017 GGATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 3071 Lambda K H 0.642 0.411 0.926 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261411373927648