Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3731 93.3 4e-14 >seq3731 Length=1156867 Score = 93.3 bits (102), Expect = 4e-14 Identities = 106/141 (75%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || ||||| || || || || ||||||||| | || |||| | ||||||||||| ||| Sbjct 1054620 GATAAAGAGGGTATCCCACCAGATCAACAACGTCTTATTTTTGCTGGCAAACAACTGGAA 1054679 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATC-TGGTCCT 26980 |||| |||| |||| ||||||||||| || |||||||||| | |||| |||| || Sbjct 1054680 GATGGAAGAACCGTCTCTGACTATAACATACAGTAAGAATCTACACTTCATCTTGGTTCT 1054739 Query 26981 GAGACTTAGAGGAGGAAAAAT 27001 ||||| | || || | ||| Sbjct 1054740 TCGACTTCGTGGGGGTATAAT 1054760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478512530802560