Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3788 84.2 2e-11 >seq3788 Length=444899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 19398 CACGGTTTTCATGTGCACGAGTTTGGTGATACCAGCAACGGGTGCACGTCAGCAGGCGAG 19457 || ||||| ||||| || || ||||||||||| | ||||| ||||| ||||| || | Sbjct 442533 CATGGTTTCCATGTTCATGAATTTGGTGATACAACAAACGGATGCACTTCAGCCGGAGCC 442592 Query 19458 CATTTTAACCCCACGCATCAACAGCATGGTGCCCCCGACG-CCGCAGAGCGGCACGTTGG 19516 |||||||| || || ||||| |||| || || || | | ||| || || ||||| Sbjct 442593 CATTTTAATCCAACTAATCAAGAGCACGGAGCTCCAAATGATAGCA-TTCGACATGTTGG 442651 Query 19517 TGACCTGGGCAACGT 19531 ||||||||| ||||| Sbjct 442652 TGACCTGGGAAACGT 442666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404964337773520