Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3731 89.7 4e-13 >seq3731 Length=1156867 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 21825 TAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACG 21884 |||| ||| ||||| || ||| | |||||| | ||||| ||||| || || | ||| Sbjct 1054519 TAGT-CAACATGCAGATTTTTGTGAAAACACTTACGGGGAAAACTATAACGCTTGAAGTT 1054577 Query 21885 GAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCT 21944 || | || || || | | | |||| ||||| |||||||||||| | || Sbjct 1054578 GAGCCTGCTGATACAATTGAAGCAGTTAANGCTAAAATCCAAGATAAAGAGGGTATCCCA 1054637 Query 21945 GTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCC 22004 | | ||||| | ||||| ||||||||||||||||| |||||| || ||| | | Sbjct 1054638 CCAGATCAACAACGTCTTATTTTTGCTGGCAAACAACTGGAAGATGGAAGAACCGTCTCT 1054697 Query 22005 GATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 || || || || ||| | |||||||| |||||| Sbjct 1054698 GACTATAACATACAGTAAGAATCTACACTTCAT 1054730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358015474346992