Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4768 96.9 4e-15 >seq4768 Length=155770 Score = 96.9 bits (106), Expect = 4e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 168429 CTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGAC 168488 ||| || || | ||| || || ||||||| |||||||| || || | |||||| || Sbjct 92617 CTTGCCTCGCAATGGGAAGACACCATAATTGTCTCTACCAACAACTCCTAAACCAGCTAC 92676 Query 168489 AGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGC 168548 ||| | |||||| |||||||||||||| || | || || || |||| || | | Sbjct 92677 AGCTAAAGTTTTAGCTGAATCACCCTCGGTTAAAATAAGAGTGCACTGAGACGAATTTTT 92736 Query 168549 CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGA 168599 || || || || || |||||||| ||||||||||| || ||| |||||| Sbjct 92737 AGTGCCTGCGTTATTTGCATCGTCTAATTTGGGGATTCCTTTGAGCTTAGA 92787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588791591614400