Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq8745 113 6e-20 >seq8745 Length=35083 Score = 113 bits (124), Expect = 6e-20 Identities = 191/277 (69%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 126906 ATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCAACATAC 126965 |||||| ||| ||||||||||||| | || |||| ||| |||| |||||||| Sbjct 19517 ATGTATAATGGATTTACTGGAAGAAAATTGAATTCACAAATCTTTTTAGGACCAACATAT 19458 Query 126966 TATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTA 127025 ||||| ||| | || ||||||||| | |||||||| ||| | || | ||||| || Sbjct 19457 TATCAACGTTTAAAGCATATGGTTGATGATAAAATACATAGTCGATCACGTGGTCCTGTT 19398 Query 127026 ACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGA 127085 || |||| ||||||| || | |||||| | | |||||| ||| | ||||| Sbjct 19397 CAAATATTAAATCGTCAGCCTATGGAAGGTCGTAGTCGTGATGGTGGTTTACGTTTTGGT 19338 Query 127086 GAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAAAGAATG 127145 ||||||||| |||||| | | ||||| || |||||||| || |||| | | Sbjct 19337 GAAATGGAACGTGATTGTCAAATAGCACATGGTGCAGCACAATTTCTACGTGAACGTTTA 19278 Query 127146 TTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGTA 127182 ||||| | ||||| | |||| | |||| |||| Sbjct 19277 TTTTTTGCTAGTGATCCATATCAAGTGTATGTTTGTA 19241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 126171 GGTATTAATGCAATTGTAGCAATCGCGTGTTACACTGGATACAATCAAGAAGATAGTGTT 126230 ||||||||||||||||| || ||||| ||| ||||| || |||||||||||| ||| Sbjct 25037 GGTATTAATGCAATTGTCGCTATCGCAACTTATACTGGTTATAATCAAGAAGATTCTGTA 24978 Query 126231 ATTCTTAATAAAGCATCTATCGAAAGAGGTTTATTTGGTACCACAA-CTTATAATACTTT 126289 ||| ||||| || |||| || | ||||| || | | || || |||| ||||| Sbjct 24977 ATTATTAATGAAAGTGCTATACAACGCGGTTTCTTCCG-ATCAGAATTTTATCGTACTTA 24919 Query 126290 TACAGCGGAAGAAACAAAAAATGGTAT 126316 || || ||||||||| | ||||||| Sbjct 24918 TAAAGATCAAGAAACAAGACATGGTAT 24892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658197053958080