Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq8745 96.9 5e-15 >seq8745 Length=35083 Score = 96.9 bits (106), Expect = 5e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 201147 GGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGAAGATAGTGTT 201206 ||||||||||||||||| || || ||| ||| ||||| || |||||||||||| ||| Sbjct 25037 GGTATTAATGCAATTGTCGCTATCGCAACTTATACTGGTTATAATCAAGAAGATTCTGTA 24978 Query 201207 ATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTCGGTACCACAA-CTTATAATACTTT 201265 ||| ||||| || |||| || | ||||| ||| | | || || |||| ||||| Sbjct 24977 ATTATTAATGAAAGTGCTATACAACGCGGTTTCTTCCG-ATCAGAATTTTATCGTACTTA 24919 Query 201266 TACAGCTGAAGAAACAAAAAATGGTAT 201292 || || | ||||||||| | ||||||| Sbjct 24918 TAAAGATCAAGAAACAAGACATGGTAT 24892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655074831832000