Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20japonicum_20[genbank_20GCA_5F000151775.1_202009-04-21] 25,048 sequences; 402,743,189 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq8745 84.2 3e-11 >seq8745 Length=35083 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 63747 ACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGGTATGA 63805 |||| || | ||||| ||||||||| | ||| | ||||||||||| ||||| || Sbjct 21382 ACCACAAGTCGGTGACAAATTTGCTAGTCG-ACATGGACAAAAAGGTACATGTGGAATAC 21324 Query 63806 TTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCA 63865 |||||| ||||| |||||||| || || || || || ||| ||| | | || | Sbjct 21323 GTTATCGTCAAGAGGATATGCCGTTCACATGTGAAGGAATTACACCAGATATTATTATTA 21264 Query 63866 ATCCACACGCTTTTCCCAGTCGTATGAC 63893 ||||||| ||| |||| ||||||||||| Sbjct 21263 ATCCACATGCTATTCCAAGTCGTATGAC 21236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666866338754880