Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq42 109 6e-19 >seq42 Length=59508269 Score = 109 bits (120), Expect = 6e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 || || ||| | || |||| || | || |||||||| | ||||| ||||| || ||| Sbjct 19153005 GCGTATAGACTTGCCTTACAAACACGGGAACAGCATATTCGTAGAGATAAAGCCACAAGT 19152946 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 ||||||||||||||||| ||| | || ||||||||| ||| |||||||| | |||||| Sbjct 19152945 AACATCTGCACAGCTCAAGCATTACTTGCTAATATGGCTGCTTTCTATGCTGTTTATCAT 19152886 Query 154014 GGTGCAGATGGACTA 154028 ||| |||| ||| || Sbjct 19152885 GGTCCAGAAGGATTA 19152871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206392458400