Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq42 114 2e-20 >seq42 Length=59508269 Score = 114 bits (126), Expect = 2e-20 Identities = 195/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 126900 GAAACAATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCA 126959 |||| |||||| ||| ||||||||||||| |||| ||||||| |||| ||| Sbjct 21233643 GAAATTATGTATAATGGATTTACTGGAAGAAAATTAAATTCACAAATTTTCTTAGGACCA 21233702 Query 126960 ACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGT 127019 || || ||||| ||| | |||||||||||| | |||||||| ||| | | | ||| Sbjct 21233703 ACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCACGTGGA 21233762 Query 127020 CAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGA 127079 | ||| || | | |||||||||| | |||||| | | |||||| || | Sbjct 21233763 CCTGTACAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACGT 21233822 Query 127080 TTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139 ||||| ||||||||| |||||| | | |||||| || ||||||||||| |||| Sbjct 21233823 TTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACGTGAA 21233882 Query 127140 AGAATGTTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGTA 127182 | | ||||| | ||||| | ||| | ||||||||| Sbjct 21233883 CGTTTATTTTTTGCTAGTGATCCATATCAGGTATATGTGTGTA 21233925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658395916414600