Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq42 122 1e-22 >seq42 Length=59508269 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 || ||| |||| ||||||||| | |||||||| ||| |||||| || || | |||||| Sbjct 19152871 TAATCCTTCTGGACCATGATAAACAGCATAGAAAGCAGCCATATTAGCAAGTAATGCTTG 19152930 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 ||||||||||||||||| || ||||| ||||| | ||||||||| || | ||||||| Sbjct 19152931 AGCTGTGCAGATGTTACTTGTGGCTTTATCTCTACGAATATGCTGTTCCCGTGTTTGTAA 19152990 Query 139379 TGCTAATCTGTATGCAGGATTG 139400 || | ||| || ||||| ||| Sbjct 19152991 GGCAAGTCTATACGCAGGTTTG 19153012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991994830200