Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq42 100 4e-16 >seq42 Length=59508269 Score = 100 bits (110), Expect = 4e-16 Identities = 196/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 194544 TGAAACAATGTATTGCGGGTTTACTGGTaaaaaaaTTGAAAATA-AAATTTTTATAGGGC 194602 ||||| |||||| || |||||||| || |||||| || | ||||||| |||| | Sbjct 21233642 TGAAATTATGTATAATGGATTTACTGG-AAGAAAATTAAATTCACAAATTTTCTTAGGAC 21233700 Query 194603 CAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATG 194662 |||||||||| || ||| | ||||| |||||| | |||||||| ||| | | | || Sbjct 21233701 CAACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCACGTG 21233760 Query 194663 GGCAAGT--AACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTT 194720 | | || || ||||| |||| ||||| | |||||| || | ||| ||| | Sbjct 21233761 GACCTGTACAAATACTT--AATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCT 21233818 Query 194721 AAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAA 194780 | | ||||| ||||||||| || ||| ||| |||||||| | ||||| ||| Sbjct 21233819 ACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACG 21233878 Query 194781 TGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 194825 |||| | | ||||| | |||||| | ||| || |||| || Sbjct 21233879 TGAACGTTTATTTTTTGCTAGTGATCCATATCAGGTATATGTGTG 21233923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632482603083800