Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq871 86.0 1e-10 >seq871 Length=199052 Score = 86.0 bits (94), Expect = 1e-10 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || ||||| || || || || || ||||| | |||| ||| || ||| Sbjct 118654 TGTACTTCGTCACTGCCTTCGTGCCTTCAGATACCGCGTGTTTCGCCAATTCACCTGGCA 118595 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || ||||| | ||| ||| | || || |||||| | Sbjct 118594 ACAACAACCGAACCGCTGTCTGCACCTCTCGGCTTGAAATTGTCGACTTCTTGTTGTAGT 118535 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | | || |||| |||||| | | | ||||| || | || ||||| ||||||||||||| Sbjct 118534 GTGATAGTCGGCTGGCCTCTGCGGCAATGCGCTCAAAGATATCGTTCACAAACGAGTTCA 118475 Query 1485650 TGATCGACATCG 1485661 |||||||||||| Sbjct 118474 TGATCGACATCG 118463 Score = 86.0 bits (94), Expect = 1e-10 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| || || ||||| || || || || || ||||| | |||| ||| || ||| Sbjct 131262 TGTACTTCGTCACTGCCTTCGTGCCTTCAGATACCGCGTGTTTCGCCAATTCACCTGGCA 131203 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || || || ||||| | ||| ||| | || || |||||| | Sbjct 131202 ACAACAACCGAACCGCTGTCTGCACCTCTCGGCTTGAAATTGTCGACTTCTTGTTGTAGT 131143 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | | || |||| |||||| | | | ||||| || | || ||||| ||||||||||||| Sbjct 131142 GTGATAGTCGGCTGGCCTCTGCGGCAATGCGCTCAAAGATATCGTTCACAAACGAGTTCA 131083 Query 1485650 TGATCGACATCG 1485661 |||||||||||| Sbjct 131082 TGATCGACATCG 131071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916152258513515