Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq42 109 7e-19 >seq42 Length=59508269 Score = 109 bits (120), Expect = 7e-19 Identities = 211/307 (69%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 193726 ATGGTTTTGATTATACTGGGTCTGAAACAATGTATTGTGGGTTTACTGGTAAAAGAATTG 193785 |||||| | | |||| || ||||| |||||| ||| |||||||| | || |||| Sbjct 21233620 ATGGTTATCAACATACCGGTAATGAAATTATGTATAATGGATTTACTGGAAGAA-AATTA 21233678 Query 193786 AAAATA-AAATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGAT 193844 || | ||||||| |||| |||||||||||||| ||| | |||||||||||| | ||| Sbjct 21233679 AATTCACAAATTTTCTTAGGACCAACTTATTATCAACGTTTAAAACATATGGTTGATGAT 21233738 Query 193845 AAAATGCATGCTAGAAGTCATGGACAAGT--GACTACTTTACATCGACAACCAAATTGTG 193902 ||||| ||| | | | ||||| || | ||||| |||| ||||| | | Sbjct 21233739 AAAATTCATAGTCGTTCACGTGGACCTGTACAAATACTT--AATCGTCAACCTATGGAAG 21233796 Query 193903 GTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTC 193962 ||||| || | ||| ||| || | ||||| |||||||| || ||| ||| || Sbjct 21233797 GTCGTAGTCGTGATGGTGGTCTACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTC 21233856 Query 193963 ATGGTGCTACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCG 194022 ||||||| | ||||| || |||| | | ||||| | |||||| | ||| || Sbjct 21233857 ATGGTGCAGCACAATTTTTACGTGAACGTTTATTTTTTGCTAGTGATCCATATCAGGTAT 21233916 Query 194023 ATGTTTG 194029 |||| || Sbjct 21233917 ATGTGTG 21233923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635170573347800