Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq42 96.9 4e-15 >seq42 Length=59508269 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/285 (68%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 193301 TGAAACAATGTATTGCGGGTTTACTGGTaaaaaaaTTGAAAATA-AAATTTTTATAGGGC 193359 ||||| |||||| || |||||||| || |||||| || | ||||||| |||| | Sbjct 21233642 TGAAATTATGTATAATGGATTTACTGG-AAGAAAATTAAATTCACAAATTTTCTTAGGAC 21233700 Query 193360 CAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATG 193419 |||||||||| || ||| | ||||| |||||| | |||||||| ||| | | | || Sbjct 21233701 CAACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCACGTG 21233760 Query 193420 GGCAAGT--GACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTT 193477 | | || | ||||| |||| ||||| | |||||| || | ||| ||| | Sbjct 21233761 GACCTGTACAAATACTT--AATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCT 21233818 Query 193478 AAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAA 193537 | | ||||| ||||||||| || ||| ||| |||||||| | ||||| ||| Sbjct 21233819 ACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACG 21233878 Query 193538 TGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582 |||| | | ||||| | |||||| | ||| || |||| || Sbjct 21233879 TGAACGTTTATTTTTTGCTAGTGATCCATATCAGGTATATGTGTG 21233923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628524246873600