Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq22 93.3 1e-13 >seq22 Length=27965507 Score = 93.3 bits (102), Expect = 1e-13 Identities = 186/266 (70%), Gaps = 10/266 (4%) Strand=Plus/Plus Query 188790 TTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTAT 188849 || ||| |||||||| || |||||||| |||||| || ||| |||||||| | ||| | Sbjct 15780596 TTTAGGCAAAACATTGTTGGCTCAAACTTTGGCTCATTATTTAAATGTACCTTTTGCTCT 15780655 Query 188850 CTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAA--AACGTA 188907 | |||| || | |||| ||||||||||||| ||||||||||| ||| ||| | Sbjct 15780656 TTATGATTGTACAAGTATAACCCAAGCTGGTTATGTTGGTGAAGATGTTGAATCAAC-CA 15780714 Query 188908 TTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTA 188967 ||| | | ||| | ||| || ||| | || | ||| | || ||| || || || Sbjct 15780715 TTG-GTAGATTATTACAAAATGCGAATTTCAATGTGGAACTTGCTCAACAAGGTATAGTG 15780773 Query 188968 TATATCGATGAAGTAGATAAAAT-TGCTAGAAAATCAGAAAGCA-CATCCAT-TACCCGA 189024 | | |||||| |||| ||||| ||| |||| | | ||| |||| | ||| ||| Sbjct 15780774 GTTCTAGATGAAATAGACAAAATAAGCTCTAAAA-CTG--GGCATCATCTTTCTACACGA 15780830 Query 189025 GATGTATCTGGCGAAGGAGTACAGCA 189050 ||||| ||||||||| || || || Sbjct 15780831 GATGTTAGTGGCGAAGGTGTTCAACA 15780856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591892349228480