Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mansoni_20[refseq_20GCF_5F000237925.1_202011-12-13] 885 sequences; 364,532,842 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=65476681 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| ||||||||||| || ||| ||| | || || |||||||| || Sbjct 54270754 GTGGACTCTTTCTGGATATTGTAATCAGACAATGTGCGACCA-TCTTCTAGCTGCTTACC 54270696 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || || || || || || || || ||||| || || |||||| ||| Sbjct 54270695 AGCAAAGATCAGACGTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGGATCTTGGCCTT 54270636 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| | ||||| || || | |||| ||||| || || | || Sbjct 54270635 CACATTCTCAATGGTGTCACTCGGCTCAACTTCCAAAGTGATCGTTTTACCAGTTAATGT 54270576 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| || ||||| Sbjct 54270575 TTTCACGAATATTTGCAT 54270558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415452157400