Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq4187 84.2 5e-11
>seq4187
Length=27755
Score = 84.2 bits (92), Expect = 5e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 61173 GGTGTTGCAAAACTATACGCTTACTGGATTTGTAAAAATTACCGCGAGTCGTATGGAATG 61232
|| ||||| ||||| ||||| || |||||| |||||| || ||||| |||||||||
Sbjct 16911 GGCGTTGCCAAACTGTACGCATATTGGATTGTGGTAAATTATCGAGAGTCTTATGGAATG 16852
Query 61233 TTTGTATGTAACTCGATTTGT-TTCAATCACGAGAGTCCCAATAGAGGTCATCAGTTTGT 61291
|||| ||| || | || || | |||||||| ||||| ||| |||| | ||| ||
Sbjct 16851 TTTGCATGCAA-TGGAATTCTATTCAATCATGAGAGCCCCCGGCGAGGAGAAACGTTCGT 16793
Query 61292 GACTCGTAAAATTAC 61306
||||| ||||||||
Sbjct 16792 TACTCGAAAAATTAC 16778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057507461043650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |