Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq6368 91.5 1e-13
>seq6368
Length=18664
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182
|||||||||||||| || || || || ||||||| | ||| | |||||||| ||||
Sbjct 832 TGAAGTGTTGATTCCTTCTGTATATTATAGTCGGAAAGAGTTCGTCCATCTTCCAGTTGT 773
Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242
||||| ||| | || || | |||||| || || | |||||| ||||| ||||| |
Sbjct 772 TTGCCAGCAAAAATTAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTATCTTGAATTT-T 714
Query 18243 TGCTTGACCTG-TGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301
|| | | ||| | | | || ||| | ||||| ||| | ||| || |||| || ||
Sbjct 713 CGCCTTAACTGCTTCTATTGTATCAGCAGGCTCAACTTCTAGGGTTATAGTTTTTCCCGT 654
Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325
| ||| || || ||||| |||||
Sbjct 653 AAGTGTCTTCACGAAAATCTGCAT 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379236023879475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |