Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq973 102 1e-16
seq4630 84.2 3e-11
>seq973
Length=64032
Score = 102 bits (112), Expect = 1e-16
Identities = 138/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 96851 CAAT-GCAATGTCACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCG 96909
|||| ||| || ||||||| ||| || || || || || || ||||| || | |||
Sbjct 13264 CAATAGCACTG-CACGATATGTTGACCAAGGAGGTAACAAGCGTCCAGGAGCCTTTGCCA 13206
Query 96910 TCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTG 96969
| ||||| |||||||||||| | || || ||| | || || || ||||| ||||| |||
Sbjct 13205 TGTACTTAGAACCTTGGCACCCTGATGTATTTCAGTTCATAGAAATGCGGAAAAATACTG 13146
Query 96970 GCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCA 97029
|| |||||| || || |||||||||| | ||| |||||| | || || ||||| |
Sbjct 13145 GCGCCGAAGAGATTCGTGCACGGGACTTGTTCTTTGCCCTCTGGATACCTGACTTGTTTA 13086
Query 97030 TGAAGCGCGT 97039
|| |||||
Sbjct 13085 TGCGCCGCGT 13076
>seq4630
Length=25536
Score = 84.2 bits (92), Expect = 3e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 70339 GGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCA 70398
||| || |||||||| || || |||||||| ||| || | || || | |||||||||||
Sbjct 12831 GGGTCTTGGTGTACCGTTCAATATTGCAAGTTATGCTTTATTAACATATATGATTGCTCA 12772
Query 70399 CATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTT 70458
||||| || | ||| | |||||||| ||||| |||||||| || || | ||||
Sbjct 12771 TATTACTGGTTTAAAACCTGGTGAGTTCGTTCACACAATTGGCGATGCGCATATTTATTC 12712
Query 70459 AAATCA 70464
||| ||
Sbjct 12711 AAACCA 12706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740842857029800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |