Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq4630 84.2 3e-11 >seq4630 Length=25536 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/159 (73%), Gaps = 10/159 (6%) Strand=Plus/Plus Query 7225 TCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTAGATTTT---GATCCATAA 7281 |||||||||||||| | | ||||||||| || || |||| ||| ||||||| Sbjct 18589 TCACCTTCTTCACGCTCAGTAAATCCTAGTCCATCTAAAA---ATTCACGAGATCCATTT 18645 Query 7282 GCATCCCAAATATGTACAGAtttttttGATAAATTTAA--AGAATTTGTAGATCCTTTAA 7339 |||||||| | ||||||| || || | | || | ||| ||||||||||| || Sbjct 18646 GCATCCCAGAAATGTACA--TTCTTCTCCGCCAGTTCACGAGAGTTTGTAGATCCACGAA 18703 Query 7340 GGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACA 7378 |||||||| ||||||||||| ||||| || |||||| Sbjct 18704 TAAACCATAATAGTTCTTCTACGATTCCGCGAAAAAACA 18742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595698042618000