Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq21907 87.8 9e-13 seq2767 87.8 9e-13 >seq21907 Length=725 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 522 GGATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 576 >seq2767 Length=37260 Score = 87.8 bits (96), Expect = 9e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 3810 GGATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 3864 Lambda K H 0.642 0.411 0.926 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261416769389980