Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13659 84.2 2e-11 >seq13659 Length=5019 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| ||||| || ||||| ||||||| | || || ||| | | Sbjct 1325 ATGCAAATCTTTGTAAAGACATTGACAGGAAAGACGATTACGTTGGAGGTTGAGCCTAGT 1266 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| ||||| ||||||||||| || ||||| || ||| Sbjct 1265 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 1206 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 || | |||| | || || ||||| | |||||| ||| | | ||| || || | Sbjct 1205 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTC--TGACTACA 1148 Query 24169 ACATTCAAAAAGAATCTAC 24187 ||||||| ||||| || || Sbjct 1147 ACATTCAGAAAGAGTCGAC 1129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429813623420025