Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq6368 91.5 1e-13 >seq6368 Length=18664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 111271 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111330 |||||| || ||||||||| | || || |||||| | || |||| ||| |||||| Sbjct 714 AAAATTCAAGATAAAGAAGGCATCCCACCAGACCAACAACGTCTAATTTTTGCTGGCAAA 773 Query 111331 CAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACAT 111390 ||| |||||||| |||| | |||| ||||||||||| || ||||| ||||| ||| Sbjct 774 CAACTGGAAGATGGACGAACTCTTTCCGACTATAATATACAGAAGGAATCAACACTTCAT 833 Query 111391 TTAGTGTTGCGTCTGCGCGGTGG 111413 | || | ||||| || ||||| Sbjct 834 CTTGTCCTCCGTCTTCGTGGTGG 856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422919586291000