Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq6368 123 2e-23
>seq6368
Length=18664
Score = 123 bits (136), Expect = 2e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 45109 TTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAAT 45168
|||| || || || || | | || ||||| || ||||||||||| || |||||||| |
Sbjct 861 TTATACCACCACGAAGACGGAGGACAAGATGAAGTGTTGATTCCTTCTGTATATTATAGT 802
Query 45169 CGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|| | ||| ||| |||| |||||| || || | || | ||||| ||||| |
Sbjct 801 CGGAAAGAGTTCGTCCATCTTCCAGTTGTTTGCCAGCAAAAATTAGACGTTGTTGGTCTG 742
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || ||||||||||||||||||||||| || | ||||||| || || | || ||
Sbjct 741 GTGGGATGCCTTCTTTATCTTGAATTTTCGCCTTAACTGCTTCTATTGTATCAGCAGGCT 682
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| ||||| || || | ||||| || || || || || || ||||| ||||||
Sbjct 681 CAACTTCTAGGGTTATAGTTTTTCCCGTAAGTGTCTTCACGAAAATCTGCATC 629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451871243315800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |