Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17307 84.2 3e-11 >seq17307 Length=2257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 168441 TGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACAGCGAGAGTTTT 168500 ||| || || ||||||| |||||||| || || |||||||| ||||| | |||||| Sbjct 2059 TGGGAAGACACCATAATTGTCTCTACCGACAACTCCAAGACCAGCCACAGCTAAAGTTTT 2000 Query 168501 CGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGCCGTACCAGCTTT 168560 ||||| ||||||||||| | || || || || | ||| | | || || || || Sbjct 1999 GGCTGAGTCACCCTCTGTTAAAATAAGAGTGCATTGAGAAGAATTTTTAGTCCCTGCATT 1940 Query 168561 GTTCGCATCGTCCAATTTGGGGATACCAGTGATCTTAGA 168599 || ||||| || ||||| || || || ||| |||||| Sbjct 1939 ATTTGCATCATCTAATTTAGGTATTCCTTTGAGCTTAGA 1901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588804055819000