Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq3361 111 2e-19 >seq3361 Length=32766 Score = 111 bits (122), Expect = 2e-19 Identities = 175/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 126900 GAAACAATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCA 126959 |||| |||||| ||| ||||||||||||| |||| ||||||| |||| ||| Sbjct 3741 GAAATTATGTATAATGGATTTACTGGAAGAAAATTAAATTCACAAATTTTCTTAGGACCA 3800 Query 126960 ACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGT 127019 || || ||||| ||| | || ||||||||| | |||||||| ||| | | || |||| Sbjct 3801 ACTTATTATCAACGTTTAAAGCATATGGTTGATGATAAAATTCATAGTCGTTCTCGTGGT 3860 Query 127020 CAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGA 127079 | || || | | |||||||||| | |||||| | | |||||| || | Sbjct 3861 CCTGTTCAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACGT 3920 Query 127080 TTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139 ||||| ||||||||| |||||| | | |||||| || ||||||||||| |||| Sbjct 3921 TTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACGTGAA 3980 Query 127140 AGAATGTTTTT 127150 | | ||||| Sbjct 3981 CGTTTATTTTT 3991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658210987415800