Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq3361 111 2e-19
>seq3361
Length=32766
Score = 111 bits (122), Expect = 2e-19
Identities = 175/251 (70%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 126900 GAAACAATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCA 126959
|||| |||||| ||| ||||||||||||| |||| ||||||| |||| |||
Sbjct 3741 GAAATTATGTATAATGGATTTACTGGAAGAAAATTAAATTCACAAATTTTCTTAGGACCA 3800
Query 126960 ACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGT 127019
|| || ||||| ||| | || ||||||||| | |||||||| ||| | | || ||||
Sbjct 3801 ACTTATTATCAACGTTTAAAGCATATGGTTGATGATAAAATTCATAGTCGTTCTCGTGGT 3860
Query 127020 CAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGA 127079
| || || | | |||||||||| | |||||| | | |||||| || |
Sbjct 3861 CCTGTTCAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACGT 3920
Query 127080 TTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139
||||| ||||||||| |||||| | | |||||| || ||||||||||| ||||
Sbjct 3921 TTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACGTGAA 3980
Query 127140 AGAATGTTTTT 127150
| | |||||
Sbjct 3981 CGTTTATTTTT 3991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658210987415800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |