Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7192 102 9e-17 >seq7192 Length=16130 Score = 102 bits (112), Expect = 9e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||||||||| | |||||||| ||| |||||| || || | |||||| ||||||||||| Sbjct 12181 ACCATGATAAACAGCATAGAAAGCAGCCATATTAGCAAGTAATGCTTGAGCTGTGCAGAT 12240 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 |||||| || ||||| ||||| | |||||| || || | ||||||| || | || || Sbjct 12241 GTTACTTGTGGCTTTATCTCTACGAATATGTTGTTCCCGCGTTTGTAAGGCAAGTCGATA 12300 Query 139391 TGCAGG 139396 ||||| Sbjct 12301 CGCAGG 12306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578829368654600