Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2131 601 5e-167
seq2254 221 2e-52
seq5398 179 5e-40
seq6368 168 9e-37
seq4612 163 4e-35
seq13659 154 2e-32
>seq2131
Length=43850
Score = 601 bits (666), Expect = 5e-167
Identities = 1104/1600 (69%), Gaps = 27/1600 (2%)
Strand=Plus/Plus
Query 195289 AATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCA 195348
|||| || | || ||||| |||||| | || || || || || ||||||||||| | ||
Sbjct 41761 AATGCCTAACGCCATTGGGATCGATCTTGGTACAACATATTCGTGTGTTGGTGTTTTCCA 41820
Query 195349 AAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGT 195408
||| || ||||| || | ||||| || || ||| | || || || || ||
Sbjct 41821 GCATGGCAAAGTGGAGATAATTGCCAATGATCAGGGTAACAGAACGACACCGAGTTATGT 41880
Query 195409 TGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAA 195468
|| || |||||| ||| ||| | |||| |||| ||||| || || ||||| ||
Sbjct 41881 GGCGTTCACAGATGCTGAGCGTTTAATTGGTGATGGAGCAAAGAACCAAGTGGCTATTAA 41940
Query 195469 CCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAA 195528
|| | ||||| || ||||| |||||||| || || ||||| ||| |||
Sbjct 41941 TCCAACAAATACAGTGTTTGATGCGAAGCGGCTAATCGGTCGTCGTTTTGATGATCCATC 42000
Query 195529 AGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCC 195588
||| || ||||| ||| | ||| | | ||| || |||| | | | || |||||
Sbjct 42001 AGTTCAGAGTGATATGAAGCATTGGCCATTTGAGGTGGTTCAAG---TCGGTGGTAAGCT 42057
Query 195589 TATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTC 195648
| |||| |||||| | | | |||||||| || || | | || || ||||||||
Sbjct 42058 GAAGATTCGTGTTGAGTATAAGGGTGAGAAAAAGTTGTTCTCCGCGGAGGAGATTTCGTC 42117
Query 195649 TATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGA 195708
|||||||||| || ||||||||| ||| ||| || |||| | || |||| ||
Sbjct 42118 GATGGTGTTGACAAAAATGAAGGAGGTTGCTGAAAGTTATTTGGGCAGGACAGTGAGTGA 42177
Query 195709 TGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768
|| ||| | || || ||||||||||||| ||| ||||| || || || || || ||
Sbjct 42178 CGCGGTTATAACAGTTCCTGCTTACTTCAATGACAGTCAACGTCAAGCAACGAAAGATGC 42237
Query 195769 TGCTGCTATTGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAA 195827
| |||||| || ||||| || ||| || ||||| || ||||| || || || || ||||
Sbjct 42238 AGGTGCTATAGCTGGTCTTAA-TGTGTTGAGAATCATTAATGAGCCGACGGCTGCGGCAA 42296
Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887
|||| |||||| | |||||||| | | || ||||| ||||| |||||| | |
Sbjct 42297 TTGCCTATGGTTTAGACAAGAAGGTTGGTGGTGAGCGTAATGTGTTGATATTTGATTTGG 42356
Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947
|||||||||| |||||||| || | | | ||||| | |||||||||||| || |||
Sbjct 42357 GTGGTGGTACATTTGATGTGTCCATCTTGACAATTGAGGATGGTATATTCGAGGTGAAGT 42416
Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT 196007
|||||||||||||||| || | || ||||||||||| || ||||| | ||| |
Sbjct 42417 CTACTGCTGGTGATACACACTTGGGAGGTGAAGATTTTGACAATCGTCTGGTGGATCACT 42476
Query 196008 TGTCTGAT-GAGTTCCGTCGAAAGAATAAG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064
| | ||| ||||||| ||| ||| | ||||| ||| || ||| | ||
Sbjct 42477 T-TGTGAAAGAGTTCCA--GAAGAAATTTGGTAAAGACATTCGTGACAATAAGCGTGCAT 42533
Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124
| ||||| || || || |||||||||||||| ||||| || | ||| | | ||||
Sbjct 42534 TGCGTCGCCTGAGAACAGCATGTGAACGTGCGAAACGTACATTGAGTTCGAGCACCCAAA 42593
Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184
| | | |||||||| ||||||| ||| || ||||| || || || | ||||| ||||
Sbjct 42594 CGAATCTGGAGATTGACTCGTTGTGTGATGGTATTGATTTTTACACGTCGATTACTCGTG 42653
Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTAT-GGAACCTGTTGAACAA 196243
|||| ||||| ||||| || | ||| | || | || || || |||||||| |
Sbjct 42654 CACGATTTGAGGAGTTGAATGCCGATCTATTCCGTG-GTACATTGGGTCCTGTTGAGAAG 42712
Query 196244 GTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303
| | || || || |||||||||||| | | || | ||||| || | || || ||
Sbjct 42713 GCTTTGCGAGATGCTAAGATGGATAAGGCCCAAATTCACGAAATAGTGTTGGTTGGTGGT 42772
Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCT-TTCTAG--CTTCTTCAATAATAAAGAT 196360
|| || ||||| || ||| | ||||| ||| || || ||||||||| || ||
Sbjct 42773 TCCACTCGTATCCCTAAGGT---ACAGAAGCTGTTGCAGGACTTCTTCAACGGGAAGGAG 42829
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
|| |||||| | || || ||||||||||| || ||||||||||| || || ||||| |||
Sbjct 42830 TTGAACAAATCTATTAATCCGGATGAAGCTGTGGCTTATGGTGCAGCTGTGCAGGCAGCT 42889
Query 196421 ATTCTCTCAGGTGTTGACAATAATAACG---TCCAAGATCTTCTGCTACTTGATGTTGCA 196477
||||| | ||| |||||| | | | | ||||| | ||| | ||||| || ||
Sbjct 42890 ATTCT---AAGTGGTGACAAGTGTGAGGCTGTGCAAGACTTGCTGTTGCTTGACGTGGCT 42946
Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537
|| | || |||||||||||||| || |||||||| ||||| | ||| | | ||
Sbjct 42947 CCATTGTCACTGGGTCTTGAAACGGCTGGTGGTGTAATGACGGCTCTGATTAAGCGTAAT 43006
Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597
|| || || ||||| ||| || ||| || | ||||| || || || || || |||
Sbjct 43007 ACGACAATCCCGACGAAGCAGACTCAAACGTTCACGACGTACTCGGACAACCAGCCTGGT 43066
Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657
|| | ||| || || | || || || || | | | ||||| ||| |||| |||||
Sbjct 43067 GTGCTTATCCAGGTGTTCGAGGGTGAGCGTGCTCTGACGAAGGACAACAATCTGCTTGGC 43126
Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717
| ||||| | | || || ||| |||| || | ||| ||| |||||| | ||
Sbjct 43127 AAGTTCGAACTCTCAGGTATCCCACCTGCTCCTCGTGGTACTCCCCAGATTGAGGTGACG 43186
Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777
|| ||||||||||| || || ||||| ||||| | |||| ||||||| | | || ||
Sbjct 43187 TTTGATATAGACGCGAACGGTATTCTGAACGTATCTGCTGTTGACAAGGGTACAGG-GAA 43245
Query 196778 TCTGAA-AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACG 196836
| ||| ||||| |||||| ||||||||||| || | | |||||||| ||||||||
Sbjct 43246 GCAGAACAAGATAACGATTACAAATGACAAGGGCCGTTTGACGAAGGAGGAGATTGAACG 43305
Query 196837 TATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876
||||| |||||||| ||||||| || || || |||
Sbjct 43306 AATGGTAGCCGATGCGGACAAGTACAAGGCTGAGGATGAG 43345
Score = 311 bits (344), Expect = 1e-79
Identities = 555/801 (69%), Gaps = 12/801 (1%)
Strand=Plus/Plus
Query 196082 GCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGAT 196141
||||| |||| || ||||| || | ||| | | ||||| | | ||||||||
Sbjct 36537 GCATGAAAACGCGCGAAACGTACATTGAGTTCGAGCACCCAAACGAATCTGGAGATTGAC 36596
Query 196142 TCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTA 196201
||||||| ||| || ||||| || || || | ||||| |||||||| ||||| |||||
Sbjct 36597 TCGTTGTGTGATGGTATTGATTTTTACACGTCGATTACTCGTGCACGATTTGAGGAGTTG 36656
Query 196202 AACTCTGATTTGTTTAGGAAGTGTAT-GGAACCTGTTGAACAAGTACTTCGTGACGCAAA 196260
|| | ||| | || | || || || |||||||| | | | || || || ||
Sbjct 36657 AATGCCGATCTATTCCGTG-GTACATTGGGTCCTGTTGAGAAGGCTTTGCGAGATGCTAA 36715
Query 196261 GATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAA 196320
|||||||||| | || || | ||||| || | || || || || || ||||| || ||
Sbjct 36716 GATGGATAAGGCCCAGATTCACGAAATAGTGTTGGTTGGTGGTTCCACTCGTATCCCTAA 36775
Query 196321 GATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACC 196379
| | ||| || || || | | ||||||||| || || || |||||| | || || |
Sbjct 36776 GGTACAAAAGTTG-TTGCAGGACTTCTTCAACGGGAAGGAGTTGAACAAATCTATTAATC 36834
Query 196380 CGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACA 196439
|||||||||| || ||||||||||| || || ||||| |||||||| | ||| |||||
Sbjct 36835 CGGATGAAGCTGTGGCTTATGGTGCAGCTGTGCAGGCAGCTATTCT---AAGTGGTGACA 36891
Query 196440 ATAATAACG---TCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTG 196496
| | | | | ||||| | ||| | ||||| || || || | || ||||||||||
Sbjct 36892 AGTGTGAGGCTGTGCAAGACTTGCTGTTGCTTGACGTGGCTCCATTGTCACTGGGTCTTG 36951
Query 196497 AAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGA 196556
|||| || |||||||| ||||| | ||| | | || || || || ||||| |||
Sbjct 36952 AAACGGCTGGTGGTGTAATGACGGCTCTGATTAAGCGTAATACGACAATCCCGACGAAGC 37011
Query 196557 AGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATG 196616
|| ||| || | ||||| || || || || || ||||| | ||| || || | |
Sbjct 37012 AGACTCAAACGTTCACGACGTACTCGGACAACCAGCCTGGTGTGCTTATCCAGGTGTTCG 37071
Query 196617 AAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGA 196676
| || || || | | | ||||| ||| |||| ||||| | ||||| | | || |
Sbjct 37072 AGGGTGAGCGTGCTCTGACGAAGGACAACAATCTGCTTGGCAAGTTCGAACTCTCAGGTA 37131
Query 196677 TTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATG 196736
| ||| |||| || | ||| ||| |||||| | || || ||||||||||| || |
Sbjct 37132 TCCCACCTGCTCCTCGTGGTACTCCCCAGATTGAGGTGACGTTTGATATAGACGCGAACG 37191
Query 196737 GAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA-AAGATTGTGATT 196795
| ||||| ||||| | |||| ||||||| | | || || | ||| ||||| ||||
Sbjct 37192 GTATTCTGAACGTATCTGCTGTTGACAAGGGTACAGG-GAAGCAGAACAAGATAACGATT 37250
Query 196796 ACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAA 196855
|| ||||||||||| || | | |||||||| |||||||| ||||| ||||||||
Sbjct 37251 ACAAATGACAAGGGCCGTTTGACGAAGGAGGAGATTGAACGAATGGTAGCCGATGCGGAC 37310
Query 196856 AAGTACAGGGAAGAAGACGAG 196876
||||||| || || || |||
Sbjct 37311 AAGTACAAGGCTGAGGATGAG 37331
>seq2254
Length=42125
Score = 221 bits (244), Expect = 2e-52
Identities = 437/643 (68%), Gaps = 8/643 (1%)
Strand=Plus/Plus
Query 196227 TGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAA 196286
|||| |||||||| | | | || | || |||||||||||| | || || | || |
Sbjct 39879 TGGACCCTGTTGAGAAGGCTTTACGAAATGCTAAGATGGATAAGGCCCAGATTCACGACA 39938
Query 196287 TTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTC 196345
| || | || || || || || ||||| || ||||| || || || || | | ||||
Sbjct 39939 TAGTGTTGGTTGGTGGTTCCACTCGTATCCCTAAGATGCAGAAGCTG-TTGCACGACTTC 39997
Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCG 196405
||||| || || || |||||| | || || | |||| |||| || | ||| |||||
Sbjct 39998 TTCAACGGGAAGGAGTTGAACAAATCTATTAATCGGGATAAAGCTGTGGTTTACGGTGCA 40057
Query 196406 GCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACG---TCCAAGATCTTCTG 196462
|| || ||||| |||||||| | ||| |||||| | | | | || || | |||
Sbjct 40058 GCTGTGCAGGCAGCTATTCT---AAGTGGTGACAAGTGTGAGGCTGTGCAGGACTTGCTG 40114
Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522
| ||||| || || || | || |||||||||||||| || |||||||| |||||
Sbjct 40115 TTGCTTGACGTGGCTCCATTGTCACTGGGTCTTGAAACGGCTGGTGGTGTAATGACAGCT 40174
Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582
| ||| | | || || | |||||||| ||| || ||| || ||||| ||
Sbjct 40175 CTGATTAAGCGTAATACGAAAATTCCGACGAAGCAGACCCAAACGTTCAAGACGTACTCG 40234
Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642
|| || || || ||||| | ||| || || | || || || || | | | |||||
Sbjct 40235 GACAACCAGCCTGGTGTGCTTATCCAGGTGTTCGAGGGTGAGCGTGCTCTGACGAAGGAC 40294
Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702
||| |||||||||| | ||||| || | || || ||| |||| || | ||| |||
Sbjct 40295 AACAATCTACTTGGCAAGTTCGAACTGTCAGGTATCCCACCTGCTCCTCGTGGTACTCCC 40354
Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGAC 196762
|||||| | || || |||||||||||||| || ||||| ||||| | ||| |||
Sbjct 40355 CAGATTGAGGTGATGTTTGATATAGACGCAAACGGTATTCTGAACGTATCTGCTATTGAC 40414
Query 196763 AAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAG 196822
|| | | | || || | ||||| |||||| ||||||||||| || | | |||
Sbjct 40415 AATGGTACAGGGAAGTAGAGCAAGATAACGATTACAAATGACAAGGGTCGTTTGACGAAG 40474
Query 196823 GAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGG 196865
|||| |||||||| ||||| |||||| ||||||| ||
Sbjct 40475 AAGGAGATTGAACGGATGGTAGCTGATGCGTGCAAGTACAAGG 40517
>seq5398
Length=21971
Score = 179 bits (198), Expect = 5e-40
Identities = 270/383 (70%), Gaps = 3/383 (1%)
Strand=Plus/Minus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
||||| || || || || || |||||||||| |||||||| ||| ||| |||||
Sbjct 6466 TTTGCCCCAGAGGAGATCTCTGCTATGGTGTTAGGGAAGATGAAAGAGTTTGCTGAATCC 6407
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| | ||||||| || | ||||||| || ||||| || || || |||| ||| ||
Sbjct 6406 TATCTTGGTAAAAAGGTAACCCATGCAGTAGTCACTGTCCCAGCCTATTTCAACGATGCA 6347
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || || || |||| | ||||| ||| | || || | || ||
Sbjct 6346 CAACGCCAGGCAACCAAAGATGCTGGCACAATTGCTGGTTTGAATATAATTCGGATCATT 6287
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
||||||||||| || ||||| |||||||| ||||| || ||| || || | || ||
Sbjct 6286 AATGAACCAACTGCTGCTGCGATTGCTTACGGTCTAGATAAG---AAAGATGGTGAGAAG 6230
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
||| | |||| |||||||| || |||||||| || || || ||| | || | |||||
Sbjct 6229 AATATTCTGATATTTGATCTTGGAGGTGGTACTTTCGACGTTTCATTACTTACAATTGAG 6170
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
||| | ||||||||| ||||| |||||| || ||||| ||||| || || ||
Sbjct 6169 AACGGTGTGTTCGAAGTAGTTGCTACAAATGGTGACACACATCTTGGTGGAGAGGACTTT 6110
Query 195986 GATGCACGTCTTCTCCGTCATTT 196008
|| |||| || | ||||||
Sbjct 6109 GACCAACGTGTTGTTGATCATTT 6087
>seq6368
Length=18664
Score = 168 bits (186), Expect = 9e-37
Identities = 178/232 (77%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918
|| ||||| || || ||||| || ||||| ||||||||||| ||||| || |||||| |
Sbjct 627 AGGATGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCT 686
Query 171919 TCAGACACAATCGATAACA-TCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGA 171977
| || ||||| || | || | || || || ||||||||||| |||||||| ||||| ||
Sbjct 687 GCTGATACAATAGA-AGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGA 745
Query 171978 TCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTA 172037
|| ||||| || ||||||||||| ||||| || ||||||||||| || || | || ||
Sbjct 746 CCAACAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTA 805
Query 172038 CAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| | || ||||| || || || || ||||| || | ||||| ||||||
Sbjct 806 TAATATACAGAAGGAATCAACACTTCATCTTGTCCTCCGTCTTCGTGGTGGT 857
>seq4612
Length=25615
Score = 163 bits (180), Expect = 4e-35
Identities = 177/234 (76%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||||||||| || | ||||| || || ||||| | ||||||||| |
Sbjct 15502 ATGCAAATCTTTGTGAAGACGTTGACTGGTAAGACGATCACGTTAGAGGTTGAGCCTAGT 15561
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 15562 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 15621
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| | || || |||||||| ||| | |||||||||||||| || |||||||||||
Sbjct 15622 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGATTACAAC 15681
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
| || || ||||| ||||| || ||||| || | || || ||||| |||||
Sbjct 15682 ATCCAGAAAGAGTCGACTCTGCATCTTGTCCTTCGTCTACGTGGTGGAATGCAA 15735
Score = 158 bits (174), Expect = 2e-33
Identities = 176/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||||||||| || | ||||| || || ||||| | ||||||||| |
Sbjct 15274 ATGCAAATCTTTGTGAAGACGTTGACTGGTAAGACGATCACGTTAGAGGTTGAGCCTAGT 15333
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 15334 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 15393
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| | || || |||||||| ||| | |||||||||||||| || |||| ||||||
Sbjct 15394 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGACTACAAC 15453
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
| || || ||||| ||||| || ||||| || | || || ||||| |||||
Sbjct 15454 ATCCAGAAAGAGTCGACTCTGCATCTTGTCCTTCGTCTACGTGGTGGAATGCAA 15507
Score = 158 bits (174), Expect = 2e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||||||||| || | ||||| || || ||||| | ||||||||| |
Sbjct 15730 ATGCAAATCTTTGTGAAGACGTTGACTGGTAAGACGATCACGTTAGAGGTTGAGCCTAGT 15789
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 15790 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 15849
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| | || || |||||||| ||| | |||||||||||||| || |||||||||||
Sbjct 15850 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGATTACAAC 15909
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || || ||||| || |||| ||||||||
Sbjct 15910 ATCCAGAAAGAGTCAACCTTACATCTTGTTCT 15941
>seq13659
Length=5019
Score = 154 bits (170), Expect = 2e-32
Identities = 175/234 (75%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||||||||| || || | || ||||| || || || | ||||||||| |
Sbjct 1325 ATGCAAATCTTTGTAAAGACATTGACAGGAAAGACGATTACGTTGGAGGTTGAGCCTAGT 1266
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 1265 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 1206
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| | || || |||||||| ||| | |||||||||||||| || |||| ||||||
Sbjct 1205 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGACTACAAC 1146
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
|||| || ||||| ||||| || ||||| || | || || ||||| |||||
Sbjct 1145 ATTCAGAAAGAGTCGACTCTGCATCTTGTCCTTCGTCTACGTGGTGGAATGCAA 1092
Score = 152 bits (168), Expect = 7e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||||||||| || | ||||| || || ||||| | ||||||||| |
Sbjct 1097 ATGCAAATCTTTGTGAAGACGTTGACTGGTAAGACGATCACGTTAGAGGTTGAGCCTAGT 1038
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | ||||| ||||| ||||| || ||||| ||||| || || ||
Sbjct 1037 GATACTATTGAGAATGTGAAAGCGAAGATCCAAGACAAAGAAGGTATTCCTCCTGACCAA 978
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| | || || |||||||| ||| | |||||||||||||| || |||| ||||||
Sbjct 977 CAACGTTTGATATTCGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGACTACAAC 918
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || || ||||| || |||| ||||||||
Sbjct 917 ATCCAGAAAGAGTCAACCTTACATCTTGTTCT 886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657670345295600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |