Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq3361 109 7e-19
>seq3361
Length=32766
Score = 109 bits (120), Expect = 7e-19
Identities = 211/307 (69%), Gaps = 6/307 (2%)
Strand=Plus/Plus
Query 193726 ATGGTTTTGATTATACTGGGTCTGAAACAATGTATTGTGGGTTTACTGGTAAAAGAATTG 193785
|||||| | | |||| || ||||| |||||| ||| |||||||| | || ||||
Sbjct 3718 ATGGTTATCAACATACCGGTAATGAAATTATGTATAATGGATTTACTGGAAGAA-AATTA 3776
Query 193786 AAAATA-AAATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGAT 193844
|| | ||||||| |||| |||||||||||||| ||| | || ||||||||| | |||
Sbjct 3777 AATTCACAAATTTTCTTAGGACCAACTTATTATCAACGTTTAAAGCATATGGTTGATGAT 3836
Query 193845 AAAATGCATGCTAGAAGTCATGGACAAGT--GACTACTTTACATCGACAACCAAATTGTG 193902
||||| ||| | | || ||| | || | ||||| |||| ||||| | |
Sbjct 3837 AAAATTCATAGTCGTTCTCGTGGTCCTGTTCAAATACTT--AATCGTCAACCTATGGAAG 3894
Query 193903 GTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTC 193962
||||| || | ||| ||| || | ||||| |||||||| || ||| ||| ||
Sbjct 3895 GTCGTAGTCGTGATGGTGGTCTACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTC 3954
Query 193963 ATGGTGCTACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCG 194022
||||||| | ||||| || |||| | | ||||| | |||||| | ||| ||
Sbjct 3955 ATGGTGCAGCACAATTTTTACGTGAACGTTTATTTTTTGCTAGTGATCCATATCAGGTAT 4014
Query 194023 ATGTTTG 194029
|||||||
Sbjct 4015 ATGTTTG 4021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634992167839400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |