Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09-
25] 23,355 sequences; 367,396,528 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq3361 100 4e-16
>seq3361
Length=32766
Score = 100 bits (110), Expect = 4e-16
Identities = 196/285 (69%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 193301 TGAAACAATGTATTGCGGGTTTACTGGTaaaaaaaTTGAAAATA-AAATTTTTATAGGGC 193359
||||| |||||| || |||||||| || |||||| || | ||||||| |||| |
Sbjct 3740 TGAAATTATGTATAATGGATTTACTGG-AAGAAAATTAAATTCACAAATTTTCTTAGGAC 3798
Query 193360 CAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATG 193419
|||||||||| || ||| | || || |||||| | |||||||| ||| | | || ||
Sbjct 3799 CAACTTATTATCAACGTTTAAAGCATATGGTTGATGATAAAATTCATAGTCGTTCTCGTG 3858
Query 193420 GGCAAGT--GACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTT 193477
| | || | ||||| |||| ||||| | |||||| || | ||| ||| |
Sbjct 3859 GTCCTGTTCAAATACTT--AATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCT 3916
Query 193478 AAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAA 193537
| | ||||| ||||||||| || ||| ||| |||||||| | ||||| |||
Sbjct 3917 ACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTTTACG 3976
Query 193538 TGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTG 193582
|||| | | ||||| | |||||| | ||| || |||||||
Sbjct 3977 TGAACGTTTATTTTTTGCTAGTGATCCATATCAGGTATATGTTTG 4021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628347708172800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |