Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20margrebowiei_20[genbank_20GCA_5F000951435.1_202014-09- 25] 23,355 sequences; 367,396,528 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4612 82.4 5e-11 >seq4612 Length=25615 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||||||| |||| || || ||||| || || || || || || || ||||| Sbjct 15823 GACAAAGAAGGTATTCCTCCTGACCAACAACGTTTGATATTCGCTGGTAAGCAGTTGGAA 15882 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | |||| |||||||||||||| |||||| || || ||| | ||| || Sbjct 15883 GATGGACGTACTCTGTCTGATTACAACATCCAGAAAGAGTCAACCTTACATCTTGTTCTG 15942 Query 28003 CGTTTGCGTGGCGGC 28017 || | ||||| ||| Sbjct 15943 CGCCTACGTGGAGGC 15957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355761107660085