Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1181 84.2 2e-11 >seq1181 Length=30581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| || || ||||| ||| | |||||||| || || || ||||||||||| Sbjct 9819 GCTTTTGCAGCAGTGGAAGGTGTCTTTTTTTCTGGTAGCTTCGCAGCTATATTCTGGCTT 9878 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 |||||||| || ||||| || || | ||| ||| || || || || | |||||| Sbjct 9879 AAGAAACGAGGTCTTATGCCTGGACTGTCTTTTAGCAATGAATTAATCAGTAGAGACGAA 9938 Query 22870 GGTCTACACTGTGACTTTGCTTGT 22893 || ||||| ||||| || || ||| Sbjct 9939 GGACTACATTGTGATTTCGCCTGT 9962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355964156148583