Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq21369 98.7 7e-16 >seq21369 Length=4562 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||| | ||||| ||||| || ||| | ||| || | || Sbjct 728 ATGCAGATTTTTGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCT 787 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | ||||| |||||| |||||||| || | || | ||||| Sbjct 788 GATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAA 847 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || || ||||||||||||||||| |||||| | |||| | |||| || ||| Sbjct 848 CAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAAT 907 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || |||||| | || | ||| | || || || Sbjct 908 ATACAGAAGGAATCAACACTTCATCTTGTCCTCCGTCTTCGTGGTGG 954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357853925704594