Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq21369 98.7 8e-16 >seq21369 Length=4562 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || ||||| || || || || || ||| Sbjct 957 ATACCACCACGAAGACGGAGGACAAGATGAAGTGTTGATTCCTTCTGTATATTATAGTCG 898 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| |||||||| ||||| | || ||||| |||||||| || Sbjct 897 GAAAGAGTTCGTCCATCTTCCAGTTGTTTGCCAGCAAAAATTAGACGTTGTTGGTCTGGT 838 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG-TTCAACGGTGTCGGTGGATTC 114331 || ||||||||||| || ||| ||| | ||| ||| ||| | || || | | || Sbjct 837 GGGATGCCTTCTTTATCTTGAAT-TTTCGCCTTAACTGCTTCTATTGTATCAGCAGGCTC 779 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || || || || || |||||||||||||| Sbjct 778 AACTTCTAGGGTTATAGTTTTTCCCGTAAGTGTCTTCACAAAAATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419816623600332