Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq29249 114 2e-20 >seq29249 Length=2658 Score = 114 bits (126), Expect = 2e-20 Identities = 195/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 126900 GAAACAATGTATTGTGGTTTTACTGGAAGAAGGATAAAGAGTAAAATTTTTATAGGTCCA 126959 |||| |||||| ||| ||||||||||||| |||| ||||||| |||| ||| Sbjct 1567 GAAATTATGTATAATGGATTTACTGGAAGAAAATTAAATTCACAAATTTTCTTAGGACCA 1508 Query 126960 ACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGT 127019 || || ||||| ||| | |||||||||||| | |||||||| ||| | | || |||| Sbjct 1507 ACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCTCGTGGT 1448 Query 127020 CAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGA 127079 | || || | | |||||||||| | |||||| | | |||||| || | Sbjct 1447 CCTGTTCAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACGT 1388 Query 127080 TTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGAGCCACACAATTTTTAAATGAA 127139 ||||| ||||||||| |||||| | | ||||| || ||||||||||| |||| Sbjct 1387 TTTGGTGAAATGGAACGTGATTGTCAAATAGCACATGGTGCAGCACAATTTTTACGTGAA 1328 Query 127140 AGAATGTTTTTATGTTCAGATCCTTTTCAAATTGATGTGTGTA 127182 | | ||||| | ||||| | |||| | |||| |||| Sbjct 1327 CGTTTATTTTTTGCTAGTGATCCATATCAAGTATATGTTTGTA 1285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657892435487560