Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20mattheei_20[genbank_20GCA_5F000951455.1_202014-09-25] 62,061 sequences; 340,818,150 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4925 109 6e-19 >seq4925 Length=16327 Score = 109 bits (120), Expect = 6e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 || ||| || | ||||||||| |||||||||| ||| |||||| || || | |||||| Sbjct 10238 TAATCCTTCCGGACCATGATAAACTGCATAGAAAGCAGCCATATTAGCAAGTAATGCTTG 10297 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 ||||||||||||||||| || ||||| ||||| | |||||| || || | ||||||| Sbjct 10298 AGCTGTGCAGATGTTACTTGTGGCTTTATCTCTACGAATATGTTGTTCCCGCGTTTGTAA 10357 Query 139379 TGCTAATCTGTATGCAGG 139396 || | || || ||||| Sbjct 10358 GGCAAGTCGATACGCAGG 10375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578549234753720